Leptosomus discolor (cuckoo roller): 104350085
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Entry
104350085 CDS
T08399
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104350085 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldi03032
]
104350085 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104350085 (TOPBP1)
DNA replication proteins [BR:
ldi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104350085 (TOPBP1)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104350085 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104350085
NCBI-ProteinID:
XP_009954120
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MKGSKEPFFVKFIKSSGNSEYFFKALESIKEFQSEEHLQILEEETALSIKENDKSLYICD
PFRGVVFSHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTSLEKDAR
EEVHKYVQMMGGHVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SIMRYTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIEKGFCQDETIYKIEAGSKLSSTPSTSTPTNH
ASKPNNQALSDLSHISNINFSGVNETACSSAMSSRLDPLPDELENLDISSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELEHFLDKTAHRPHV
VTAKWLLESFSKGYLHPVEQYIPLNYQLLENPILEQPGIKSVLPKNKCLLKKEAVNIIKH
QKAAEDDFLSQYINNDSTLDNIEKLTSRTFSDVTHLTVQGENQSSISNGSLGESSALAEG
GLFVRKRFLLLGFGEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVKPTVGDV
VTNTWLITCVEQQLLLDPQSNPLFTPVPVMEGVTPLEDCVLSFSQFTGAERDSLVYLAGL
LGARVQEFFVRKANAKKGMFASTHLVVREPDGSKYEAAKKWNLPAVTVAWLLQSARTGKK
ADERKFLVENAEAEESSITQLSKTPATVKSPDSEQPTYLLEAGKKPAVTPLDINRFQSKA
FQAVISHHIGKTTPLAQGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGG
PDQKNRKLSTPLSEVIGRNLKLALANSARHTVALTASPQLTAAQPEVEEEPKPLADVVIY
VSKKLGNKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIVSE
YWLLESAQQCKRLPESLFPHTYNPKMSLDISAVPDVRLSSSSKLLSTGKPAEEDEIIPVD
EDDAEDDVTTDQIRETVTIGEEQTVTSESKGVLTQALEMRENFQRQLQEIMSATSLVKPQ
GRRGSLSRSSFDGSPTTPDSTRSVRNGRSRVLEALRQSRQALTDINTEPSQSEQIIWDDP
TAREERARLVSNLQWPNSPSQYTEQGQSNANKNMEESAFKGSLTDAEIAGMAVPEAGNGD
LIEGLKNPVCKDLETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKTVTEDEKADEEPEK
HRKFQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPSCTHIVVGHPLRNEKFLASMAAGK
WVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGRQ
ETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSKLK
PDDIKVNIAEVAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAESYLQTSTELGTALSQ
KRKIPGEISRVKRSRIH
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggagccgttttttgtgaaattcataaagtcttctgggaactcggag
tatttttttaaagctcttgagtctataaaagaatttcagtcagaagaacatctccagatc
cttgaagaagaaacagcactcagtataaaagaaaatgataaatcgctttacatttgtgat
ccttttagaggcgttgttttcagtcatctcaaaaagcttggttgcaggattgttggacca
caggtagttctgtactgcatgcagtcccagcgatgcgtcccaagagctgagtatcctgtg
tacaatatgaccatggccgatgtaacagtatcctgtaccagcctcgaaaaagatgctagg
gaagaagttcataaatatgtgcagatgatgggtggacatgtgtacagagacctcaatgtg
tcagtaactcatcttatagctggagaagttggcagcaagaaatacttagtagctgcttct
ctgaaaaaacctattttgcttccttcttgggttaagacactgtgggataaatctcagcaa
agcataatgagatacactgatgttaacatggaagactacgcttgtcctgtgttccttggc
tgtacaatttgtgtaacaggcttaagtagttcagacaggaaggaagtccagcgcctcact
gctgaacacggtgggcaatatacggggcagctcaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgccaaaaaatggaacgtgcactgtgtg
tctgtgcagtggttttctgacagcattgagaaaggcttctgtcaggatgagacaatatat
aaaatagaggctggatcaaaactgagtagtacacccagtacatcaacacctacgaatcat
gccagcaagcccaataatcaagccctttcggacctcagccacatttccaatatcaatttc
agtggtgttaatgaaactgcatgtagttctgctatgagcagcagactggatcctcttcct
gatgagctggaaaacttggatataagttcttttcaagcccctgaagatttgttagatggg
tgtcgaatctatctgtgtggcttcagtggcaggaagctggacaagatgagaaggcttatt
aattgtggtggtggtgttcgatttaatcagcttaatgaagatgttacccatgtcattttg
ggggaaaataatgatgagctggaacactttttggacaagacagctcacaggcctcatgta
gtaacagcaaaatggttgctggagtcatttagtaaaggttatctgcatccagtggagcaa
tatatccccctaaactaccagctgttagagaaccccattttggagcaacctggaataaag
tcggttcttcccaaaaataagtgtctcttgaagaaagaagctgtgaacattataaagcac
cagaaagctgctgaagatgacttcctctctcaatatataaataatgattctacattagat
aacattgaaaaactaacatccagaaccttcagtgatgttactcacttaactgttcaagga
gagaatcagtcttccatctctaatggttctttgggagagtcttctgccctggctgaagga
ggcttatttgtcagaaagcgatttcttcttttgggttttggtgaagaggatgagtcctgc
attgcagatattataaaggagaatgctgggaaaattctgccgctgcagagcagaaccatt
gcagactatgccgtggtccctctgttggggtgcacagtgaagccaactgttggcgatgtt
gtcacaaatacgtggctgataacatgtgtggaacagcagctccttttagatccccagtca
aatccacttttcacaccagtcccagtaatggaaggagttacccctctggaagattgtgtt
ctttcttttagccagttcactggtgcagagagagactccctggtttatctggcaggactg
ctaggagccagagtccaagaattctttgtgcggaaagccaatgcaaaaaagggaatgttt
gccagtacccatcttgtggtgagagaaccagatggttccaagtatgaagctgctaagaag
tggaatttgccagccgtcacggtggcttggcttttgcagtctgcaaggacaggaaagaaa
gcagatgaaaggaagttcttggttgaaaatgcagaggctgaagagagttccattactcag
cttagcaagacaccagcaactgttaaatctcctgattcagaacaacctacttatctcctt
gaagctggaaaaaaaccagctgtgactcctcttgatatcaacaggttccagagtaaagct
ttccaagctgtaatctctcatcatattgggaagacaacccctcttgcacaagggggactg
ccacagaaagaaccatctttacatcttgatacaccatcaaaatttctttccaaagacaag
ttgttcaagccttcttttgatgtaaaggatgctcttgcagctttggaaactccaggaggt
cctgatcaaaaaaacaggaaactgagcacacctctctctgaagttattggcagaaacttg
aaattagcactggcaaacagtgcaaggcatacagtagctcttactgccagccctcagttg
actgctgcacagccagaagtggaagaagagcccaagcctctagccgatgttgttatatat
gttagtaaaaaacttggtaataagcaaagtgaactgaacgcagtagcagcttctcttggg
gcagactacagatggtgctttgatgaaacagtaacacacttcatctacaagggaggacaa
aatgacaacaataaggagtacaagtctgttaaagaacggggcatacatattgtttcagaa
tactggcttttagagagtgcccaacaatgtaaacggcttcctgaatctctctttcctcac
acttacaatcccaaaatgagcctggacatcagtgcagtgccagatgtcaggctctcttcc
tccagtaaacttctgtcaactggaaaaccagcagaggaagatgagattattccagtggac
gaagatgatgctgaagatgatgtaactactgaccaaataagggaaactgtcactataggg
gaagaacaaactgtaacaagtgaatccaaaggagtgttaacccaagcactagaaatgagg
gagaacttccaaaggcagctgcaggagatcatgtctgccacatcactagtgaagccacaa
gggcgaagaggatccctttcaaggagcagttttgatggttctccgaccactcctgacagc
acacgatctgtgcgaaatggccgcagtagggtcttggaagctctaaggcaatcccgtcag
gcactcacagatataaacacagagccatcccagagtgagcagatcatctgggatgatcct
actgcaagggaggagagagcaagacttgtcagcaaccttcagtggcctaatagtccctcc
cagtacactgagcaaggtcagagtaatgccaataagaacatggaggaatctgccttcaag
ggatctttaactgatgcagagattgctggtatggctgttcctgaggctgggaatggagat
ttgattgaagggctaaagaatcctgtatgtaaagatcttgaaacaccgattaaagatcac
ttgatccccactccgcaggcccccagcattgctttcccactggctaaccctcctgtggca
ccacagcccaaagaaaagactgttacagaagatgagaaggctgatgaagaaccagaaaaa
caccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgccatctg
attgaggaattaggtggaatagtacttgagaaacagtgctttgatccaagttgcacacac
attgttgtgggacatcctcttcgaaatgaaaaattcttggcttcaatggcagctggaaag
tgggtgcttcatcgttcctacctggaggcatgtagaggagctggatgctttgttcaggaa
gaagattacgagtggggaagtaattccatacttaatgttttgcctggaatcaacgtaaac
cagaagaaactagcgcttgcagccatgaggtggaggaaaaaaattcataaagggaggcaa
gaaactggtattgttgagggagctttcagtggctggaaagtgatcctgaatgttgatcaa
accaaggaagcgggattcaggcgccttcttcagtccggaggagcaaaagtgttttctggt
cattctgtgtctctctttaaagaagcgactcatctctttgctgacttcagtaagctgaag
ccagatgacatcaaggttaacatagcggaggtggcagcccagggagtgaactgcctgaaa
ccggagtacatcgccgactacctcatccaggatccacctcccccaatggagtcttactgc
ctgccggaagctgaatcttaccttcagactagcacagaacttggaactgcgttatcccag
aaaagaaaaatacctggagaaattagcagagtcaagcgatccagaatacactga
DBGET
integrated database retrieval system
