Leptosomus discolor (cuckoo roller): 104350926
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Entry
104350926 CDS
T08399
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldi03009
]
104350926 (IGHMBP2)
03012 Translation factors [BR:
ldi03012
]
104350926 (IGHMBP2)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104350926 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104350926 (IGHMBP2)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
Other ribosome biogenesis factors
104350926 (IGHMBP2)
Translation factors [BR:
ldi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104350926 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Helicase_RecD
ResIII
Viral_helicase1
DEAD
SLFN-g3_helicase
nSTAND3
AAA_22
AAA_16
UvrD-helicase
Flavi_DEAD
AAA_25
IstB_IS21
AAA
DAP3
ABC_tran
T2SSE
VWA_2
NTPase_1
PhoH
AAA_33
Herpes_ori_bp
Glyco_hydro_46
DnaB_C
cobW
DUF4363
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104350926
NCBI-ProteinID:
XP_009955195
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
AWQESVSLKELQRRGVCLLKLQAASQRTGLYGRLLVTFQPRKCDSDAELPYNSFGPGDIV
GLYDSAGQADPLSTGIVTRVTSRAVTVAFEESQGDVLSLDREGSYRLLKLANDVTYRRLT
KALTALKQYHGGPASDLIDVLFFSSEPSAFSETKPPKLYNDSLDASQREAVSFSLAQREL
AIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGYRAPILRLGHPA
RLLEPIQQHSLDAVLAHGDNAQIVADIRKDIDQAFAKTKKAQDKGERSHFLGEIKALRKE
LKEREETAMAAALTRASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPL
LKAPKCILAGDHKQLPPTIISHKAAAKGLALSLMERLVERYGEKTVKMLTVQYRMHEAIM
QWASSELYGGRLTAHPSVAQRLLRDLPGVASTEETAIPLLLIDTAGCGLFELEVEDEQSK
GNPGEVQLAGLHIQALVEAGVKARDIAVVAPYNLQVDMLREHLCHRYPELEIKSVDGFQG
REKEAVILSFVRSNRKGEVGFLAEERR
NT seq
1703 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaggaaagtgtctccctgaaggagctgcagcgcaggggcgtctgcttgctgaa
actccaagctgccagccagaggactggcctctacggacggctgctcgtgacctttcagcc
tagaaagtgcgattcagacgccgagctgccctataacagcttcgggcctggggacatcgt
gggcctttacgactccgctggccaggctgatccgctctccaccggcatcgtcacacgcgt
cacctccagagcagtgaccgttgcctttgaggagtcccagggcgacgtgctgagcttgga
ccgggagggctcctaccgcctgctcaaactggccaacgacgtcacctaccgcaggctgac
aaaagctttgactgcactaaagcagtatcacggtggcccagcctctgatctgatcgacgt
cctcttcttttcttctgagcccagcgcattcagtgaaacaaagcctccaaagctttacaa
cgactcactggatgcatcgcagagggaggccgtctccttctcgctggcgcagagggagct
tgccatcgtccatgggccaccgggcacagggaagaccaccacgctggtagagatcatctt
gcaagctgtacagcagggcctgaaagtcctctgttgtgcaccgtccaacgtggccgtgga
taacctggtggaaaggctggccggctacagagcccccatcctgcggcttgggcaccctgc
tcgcctgctggagcccatccagcagcattccctggacgcagtcttggcccatggcgacaa
cgcccagatagtggcggatatcaggaaggacatcgaccaggcctttgcaaaaaccaaaaa
ggctcaagacaagggagagcgcagccattttctcggtgagattaaggcactgagaaagga
gctgaaggaacgagaagaaactgccatggcagcagccctgacccgtgccagtgttgtcct
cgccacgaatacaggcgcttcctccgatggcccactgaagctgcttcccgaaaaccactt
tgatctcgtggtgatagacgagtgtgctcaggccctggaagccagttgctggatacctct
gctgaaggctccgaagtgcatcctggccggggatcacaagcagcttccccccaccatcat
ctctcacaaggctgctgccaagggccttgcactcagcttgatggagcgtctcgtcgagag
gtacggggagaagactgtgaagatgctgacggtgcagtaccggatgcacgaggccatcat
gcagtgggcttcctcggagctgtacggcggccggctcactgctcacccgtcggtagccca
gcgtttgctcagggacctgccgggcgtcgcctctacagaagagaccgccattcccttact
gctcatcgacactgctggctgcggcctgtttgagctggaggtggaggatgaacagtctaa
ggggaatccaggggaggtgcagctggccgggttgcacatccaagccttggtggaagctgg
tgtgaaggcaagagacatcgctgttgtagccccctacaacctccaggtggacatgctaag
ggagcacctttgccacaggtacccagagctagagattaaatcagttgatggtttccaagg
aagagagaaagaggcagtgatcctgtcgtttgtgagatccaacaggaaaggtgaggtggg
cttcctggcggaggagcggcgga
DBGET
integrated database retrieval system
