Leptosomus discolor (cuckoo roller): 104351528
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Entry
104351528 CDS
T08399
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03250
Viral life cycle - HIV-1
ldi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104351528 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104351528 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104351528 (SAMHD1)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104351528 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
Pdc1_Ge1
HARE-HTH
PDEase_I
Motif
Other DBs
NCBI-GeneID:
104351528
NCBI-ProteinID:
XP_009955957
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
LPSERLQVLACLNRLQQQHMDVMKVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGG
TYFVFPGASHNRFEHSIGVGYLAGCLVRALKERQPELDITQRDILCVEIAGLCHDLGHGP
FSHMFDGRFIPLARPDLKWKHETASVEMFEHLITSNKLEEVMKSYGLVLEEDMVFIKEQI
GGPIDESACEKLWPYRGRQKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYN
RLLKFTRVCEVKNQKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKIGNIIEIMITEAFQK
ADKFVKIEGSGGKRYKISTAMEDMEAYTKLTDNIYLEILHSSSPEMKEAREILHKIERRE
LYKFLGETQPETMREIVKSNTLAESIANAKPEKDPPDVELKAEDFIIDVINIDYGMKEQN
PIDNVFFYCKADPSKAVKITKEQVSKLLPMTFAEQIIRVYCKSQDPATISAAKQYFIQWC
IDKDFTKPQDGDVVAPHLTPMKKSWNNTGDDEHRTASEPSCKQRLPFDK
NT seq
1591 nt
NT seq
+upstream
nt +downstream
nt
cctcccctcggagagactgcaggtgctggcctgcctgaacagactgcagcagcagcacat
ggacgtcatgaaggtttttaacgatccaattcacgggcacattgaaatacatcccctcct
tgttcggatcatcgacacgcctcagttccagcgcctccgatacatcaagcagctgggggg
cacttactttgtttttccgggagcctctcacaaccgctttgaacactccataggcgtggg
ctacctagcaggatgtctggttcgtgcactgaaggagagacaaccagaactggatataac
ccagcgagacatcctctgcgtagaaattgctgggctttgtcatgatttgggtcatgggcc
attttcacacatgtttgatggaagatttattccactcgcacgtccagatttgaagtggaa
gcatgaaactgcttctgttgaaatgtttgagcacctgattacttccaataaactagaaga
agtcatgaagtcgtatggtcttgtcctggaagaagatatggtcttcatcaaggaacaaat
aggagggcctatagatgaaagtgcttgtgagaaattgtggccctaccgtggtcgacaaaa
ggagaaaagtttcctatatgagatagtagctaacaaaaaaaatggcattgacgttgacaa
atgggattattttgcaagggattgccatcacctaggaatccagaataattttgattataa
cagattacttaaattcactcgggtctgtgaagtcaaaaaccagaagcacatctgtacccg
tgacaaggaagttggaaatttgtatgatatgttccacacacggaattgcctgcaccgacg
agcctaccagcataagattggcaacatcattgaaataatgattacagaagcctttcagaa
agcagacaaatttgttaaaatagaaggctctggaggaaaacggtacaagatttctacggc
aatggaggacatggaagcctacactaagctaactgataatatctacctggaaattctgca
ctcaagttctccagaaatgaaggaggcacgagaaattttgcataaaatagaacgacgtga
attatacaagtttttaggagagactcaacctgaaacaatgagagaaattgtaaagagtaa
caccctggcagaaagcattgctaatgccaagccagaaaaggatcctccagatgtggagct
gaaggctgaagatttcataattgatgttatcaatatagattacggaatgaaagaacagaa
tcccatcgataatgttttcttctattgcaaggctgatccttccaaggcagtcaagatcac
taaagaacaggtttcaaagcttttacccatgacgtttgcagagcagattatccgggttta
ttgcaaaagtcaggatccagctactatttcagctgcaaaacagtattttattcagtggtg
tatagacaaggatttcactaaaccacaggatggtgatgtggttgcccctcatctaactcc
aatgaagaagagctggaataacacgggagatgatgaacacaggacagcttcagaacccag
ttgcaaacaaaggcttccttttgataagtaa
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