Leptosomus discolor (cuckoo roller): 104353022
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Entry
104353022 CDS
T08399
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03420
Nucleotide excision repair
ldi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104353022
09124 Replication and repair
03420 Nucleotide excision repair
104353022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ldi04121
]
104353022
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104353022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ldi04147
]
104353022
Ubiquitin system [BR:
ldi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104353022
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104353022
TCR (transcription coupled repair) factors
Cul4-CSA complex
104353022
Exosome [BR:
ldi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104353022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
104353022
NCBI-ProteinID:
XP_009957785
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
IGTGSHWAASFQLPVSSFAERPKLPDNYTQDTWQKLHEAVGAIQSSISIKYNLEELYQAV
ENLCSYKVSATLYKQLRQVCEDHVKAQILQFREDSLDSLLFLKKINKCWQDHCRQMIMIR
SIFLFLDRTYVLQNSMLPSIWDMGLELFRNHVISDKQVQNKTIDGILLLIERERTGEAVD
RSLLRSLLSMLSDLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEE
GDRVITYLDHSTQKPLIACVEKQLLGEHLSAILQKGLDNLLDENRISDLTQTYQLFSRVK
GGQQILLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLM
KESFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFE
AFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQ
YMQNQSDPGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQ
TTLGHAVLKAEFKEGXXXXXXXXXXXVLLMFNEGDEFSFEEIKMATGVEDSELRRTLQSL
ACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQD
RQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDN
PNQYHYVA
NT seq
2188 nt
NT seq
+upstream
nt +downstream
nt
gattggtacaggctcccattgggcggctagttttcaactacctgtatcttccttcgcaga
aagacccaaattaccagataattatactcaggacacctggcaaaaacttcacgaagcagt
gggagcaatacagagtagcatttctattaaatacaaccttgaagagctctaccaggctgt
tgaaaatctctgttcttacaaagtctctgctacactgtacaaacagctgcgacaagtctg
tgaagatcatgtgaaagcacaaatccttcaatttagagaagattctctggatagtctttt
atttttaaagaagataaataaatgctggcaagatcattgcagacaaatgatcatgatcag
aagcattttcttatttttggatcgtacatatgtacttcagaattcaatgcttccttctat
atgggatatggggctagagttatttagaaatcatgtcattagtgacaaacaagttcaaaa
taagaccattgatggaatcctcctgctgatcgaacgagaacgaactggtgaagctgtgga
cagaagtttgctgcggagtttgttgagcatgctgtctgatctgcaggtttacaaggaatc
atttgaacagaggtttctggaagagacaaattgcttatatgctgcagaaggtcaaaggtt
aatgcaagaaagagaggtcccagagtatcttcaccatgttagtaaacgtttggaagaaga
aggagacagagtaataacatatttagaccacagcacacagaaaccactgattgcttgtgt
ggagaagcagctactaggagaacacttatcagctattttgcaaaaagggcttgataacct
gcttgatgaaaatagaatatcagatttgacccagacataccagttgttcagccgggtaaa
aggtgggcagcagatccttttgcaacactggagtgaatacatcaagaactttgggacaac
aatagtggttaatcctgaaaaagacaaggatatggtgcaagagctactagattttaagga
taaagtggaccatatcatagaagtgtgctttcagaaaaatgaaaaatttataaacttgat
gaaggagtcctttgaaacatttatcaacaagagaccaaataagcctgcagaattgatagc
aaaatatgtggattccaagctaagagctggtaataaagaagcaacagatgaagagctgga
aagaatccttgacaaaatcatgatcatatttagattcattcatggtaaagatgtgtttga
ggcattttataagaaggacttggccaaaagactgctggttgggaaaagtgcgtcagtaga
tgctgagaagtccatgttgtcaaagcttaaacatgaatgtggtgctgcttttaccagcaa
actggagggcatgttcaaggacatggaactgtcaaaagatgtcatggttcaatttaagca
gtatatgcagaaccaaagtgatccgggaaatatagacctgacagtaaatatattaactat
gggttattggccaacttacacacctatggaagtccacttaaattcagagatgataaagct
tcaagaggtatttaaaacattttacctgggaaaacacagtggccgaaagcttcagtggca
gaccactttagggcacgctgtcctaaaggcggaatttaaggaaggaaannnnnnnnnnnn
nnnnnnnnnnnnnnnnntagtgttgcttatgtttaatgaaggagatgaattcagttttga
agaaattaaaatggccactggcgtagaggacagtgaattaagaagaaccttgcaatcttt
agcttgtggaaaagcacgagtattgatcaaaaatccaaagggcaaggacgtagaagatgg
agataaattcatctttaatggtgatttcaagcataaattgtttagaataaagatcaacca
aatccaaatgaaagaaacagtcgaggaacaggtcagcacaactgaaagagtatttcaaga
caggcaatatcagattgatgctgctattgtgcgaataatgaagatgagaaagactcttgg
tcataatctccttgtttctgaattatataatcaactgaaatttcctgtaaagcctggaga
cttgaaaaagaggattgaatctctcattgacagagactatatggagagagacaaagacaa
ccccaatcagtaccactatgttgcataa
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