Leptosomus discolor (cuckoo roller): 104353141
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Entry
104353141 CDS
T08399
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03013
Nucleocytoplasmic transport
ldi03015
mRNA surveillance pathway
ldi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104353141 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
104353141 (NCBP1)
03015 mRNA surveillance pathway
104353141 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104353141 (NCBP1)
03041 Spliceosome [BR:
ldi03041
]
104353141 (NCBP1)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104353141 (NCBP1)
Spliceosome [BR:
ldi03041
]
Common components
Common spliceosomal components
Cap binding complex
104353141 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Vfa1
Motif
Other DBs
NCBI-GeneID:
104353141
NCBI-ProteinID:
XP_009957940
UniProt:
A0A091Q804
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
SNSSLESNLEGLAGVLEADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFG
GEFVEAMIRQLKECLKVNMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDV
PQVRCDWYMFAFLSSLPWVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADK
PHPQEEYLDCLWSQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSV
YPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPG
NNKIPLNYHIVEVIFAELFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMR
LDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSY
HQRIIDIVPASFSVLSPANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNEEIFSIL
KDVPNPNQDDDDDEGFTFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDE
GKLHVLRVVYEVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEIL
HSTIRKMNKHVLKIHKELEETKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQ
EKVESAQSEQKNLFLVIFQRFIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQ
IIQQYMVTLENLLFTAELDHHILAVFQQFCALQA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
agtaattcatctttggagagcaacttggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactatgtacagttgcgcgtctgttgccagaa
aagcttactgtttacaccacactagttgggttgctgaatgccaggaactacaattttggt
ggggaatttgtggaagccatgattcgtcaacttaaagaatgtctgaaagtcaatatgtac
aatgaagctgtgcatttagttcgttttctctctgatcttgtaaattgtcacgtaatagct
gcaccttcgatggtagctatgtttgagaactttgtgagtgtgacacaggaggaagatgta
ccccaagtgcggtgtgactggtatatgtttgcatttctgtcatctctgccttgggttgga
aaggagttatatgagaaaaaagatgctgaaatggatcgtctcttgtctcagacggaaagc
tatttgaaacgccgccagaagattcatgtacccatgctacaggtttggactgctgataaa
ccccatccacaagaagagtatttagactgtctttggtctcagattcagaagttgaaaaaa
gaccgttggcaagaacgacacattctgaggccctacttggcttttgacagcattctttgt
gaagcgctgcaacacaatctgcctccgttcactcctccgcctcacaccgaagattcagtg
tacccgatgccaagggttatttttaggatgtttgactacacagatgaccctgagggccct
gtcatgcctggcagccactctgttgaacgattcgtaatagaagagaatcttcactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagattcccttgaactaccacatagtagaggtgatatttgcggaattgtttcaa
cttccatctccaccacacattgaagtcatgtacacaacacttctgattgaactgtgcaaa
cttcaacctggctctttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggatacaatgaatacaacatgtgtggacagatttattaactggttttctcaccacttg
agcaactttcagttccgttggagctgggaagattggtcagattgtcttactcaggacctt
gaaaagcccaaacccaaatttgtgagagaggttttggaaaagtgtatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtctgcatttacaaatatggagatgaaagtaataggtctcttcctggatatactgtggct
ctctgtttaacaatcgcgattaaaaataaggccagtaatgaggaaatcttcagcattttg
aaagatgtgcctaatccaaaccaggacgatgatgatgatgaaggatttaccttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtctttcagccac
tccttcagtgccctggcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgag
gggaaactccatgttctaagggttgtatatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaatagttgactgtgctgcagtagcaaac
tggatcttctcttcagaacttgcacacgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgttctgaagattcacaaagaactggaggag
accaaggcaagattggccaggcagcacaaaagacgagacagtgatgacgatgatgatgac
gacgaccgaagcagtgatcgtgaagacggaccactagaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagcgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaactgagcacttagtgcgctgtgagactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctgcagcatcaccag
ataatccagcagtacatggtgaccctagagaacctcctgtttacagctgaactggaccac
cacatactggctgtatttcagcagttctgtgctctgcaggcctga
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