Leptosomus discolor (cuckoo roller): 104353233
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Entry
104353233 CDS
T08399
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104353233 (TRIM71)
04121 Ubiquitin system [BR:
ldi04121
]
104353233 (TRIM71)
Enzymes [BR:
ldi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104353233 (TRIM71)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104353233 (TRIM71)
Ubiquitin system [BR:
ldi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104353233 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
Pannexin_like
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
104353233
NCBI-ProteinID:
XP_009958065
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGRHVGHSCIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVTTRHKKALEDKMTALVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQXXXXXX
XXXLLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLT
KATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSDQQNGT
YLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLC
RPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDISRRI
VVADKDNHRIQIFTFEGQFILKFGEKGTRNGQFNYPWDVAVNAEGKILVSDTRNHRVQLF
GPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSE
GTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMDRPSGI
AVTPDGMIVVVDFGNNRILVF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctgtatctacctccaagatgccctacaggattccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagt
atcgaacaggcccaggctgtggcagagcaagttgagatgaaagcgaaggtggtacagtct
gaagtcaaagcagtgaccactagacataagaaggccttggaagacaaaatgaccgctctg
gtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaagttgaaaagttacgt
cagaacctaaataagctggacaacaccattagtgctgttcagnnnnnnnnnnnnnnnnnn
nnnnnnnntctactggcccgggaccgtatgctggctcaggtgcaggagctgaagaatgtg
agaggccttctccagccacaggaagatgataggatcatgttcactccccctgaccaggca
ttgtatatggccattaaatccatgggctttgtcagcagcggggcttttgctcctctgacc
aaagccactggggaaggcctcaagcgtgctctgcagggcaaagtggcctctttcacagtg
ataggctatgaccatgatggtgagcctcgcctttcaggaggtgacatgatctctgcagtg
gtgatgggcccagatggaaaccttttcggagcagatgtcagtgatcagcagaatgggacc
tacctggtcagctaccgtccacagcttgagggagagcacctggtatctgtgatgatgtgc
aaccaacacattgagaacagccccttcaaagttgtggtgaaatctgggcgcagctatata
ggcatcgggttgccggggctctcctttggcagtgaaggagacagtgacggcaaactctgc
cgcccctggggggttagtgtagacaaagaaggctacatcattgttgctgaccgcagtaac
aaccgcatccaggtgttcaaaccatgcgggaccttccatcacaagtttggcacactgggc
tccaggccgggccagttcgatcgccctgccggcgtggcctgtgacatttcgcgtaggatc
gttgtggctgacaaggacaatcatcgcatccagatattcacgtttgaggggcagttcatt
ctgaagtttggggagaaaggaacaaggaatgggcaattcaattacccatgggatgtggcc
gtcaatgcagagggcaagatcctggtctctgacacaaggaaccatcgtgttcagctgttt
gggcctgacggtgtgtttcttaacaagtatggcttcgaaggggcactctggaagcacttt
gattcccccagaggtgtgactttcaatcacgagggccacttggtagtgacagacttcaac
aaccatcgccttctggtcatccatccagattgccagtcagcacgctttctgggctcggag
ggcaccgggaacggccagttcctgcgcccgcagggagtggcggtggatcaagaggggcgc
atcattgtggccgattccaggaaccaccgggtgcagatatttgagtcaaatggtagcttt
ttatgcaagtttggcactcagggaagcggctttggtcagatggaccgtccttcaggtatc
gctgtcacccctgatggcatgattgttgtggtcgactttggaaacaatcgaattctcgtc
ttctaa
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integrated database retrieval system
