Leptosomus discolor (cuckoo roller): 104353246
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Entry
104353246 CDS
T08399
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104353246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldi03036
]
104353246
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104353246
Chromosome and associated proteins [BR:
ldi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104353246
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104353246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104353246
NCBI-ProteinID:
XP_009958078
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MPTDNSHLPDGIQEQNVVTISSNNCLHNAEEVGIEQENGVCNSDLGNNIRVPNSASQPST
SMAAPLEVPRRGQSLLQINRQQIQSISHSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKAAKIADAEKEYQSVLDDLRLCTTSLKQINKIIEQLSPQAADNKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEEDEEPGPSCLGSMLMPVQETEWE
ELIRTGQMTPFGTKIPQKPERKTRQLMLNEESDFEKYLADQAKLSSERRKLSHHKAAKKK
AQAKNGQCVAPASTTKEKRGKALSKTDKRLKKHMRRLQKHALQIQSKAKIPKEYKYLGAR
KFRRVQEDDSGESEYVPDEELFDPEAAEEEEQQASYAENDSDYELRNLPRKRRCLVKRGF
KDAEDDADFFPSSEEEEHTLVKRKVKRWRDDGDEDCYKQRLRTWQKERLKDKEHRTAEEL
SEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAF
LAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTS
KKVKLIHEIASCHGILITSYSYIRLMQDSIHSYDWHYVILDEGHKIRNPNAAVTLACKQF
RTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK
TAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFINSKEV
YQILNGDMQIFSGLVALRKICNHPDLFSGGPRILKGVPDAEVEEADQFGYWKRSGKMIVV
ESLLKIWHKQGHRVLVFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNED
KSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLT
AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFALSSPDVSQGTETSAIFAG
TGSDVQVPKQQLKRKFEKPPDNDTCKGDVHLTESTSPKYSKSCNSYSTTHMTNYSKAIET
SEETKGNWETFDQNSYAKDNTQAATNVNSLNKSKEDSLERPDKSVSQSLPGDAGSSENAE
CLNAVVADEVPGAAKANVKGDFSLTCGAAGSWEKQVATTEDQQLIIYQHNNHYKRTSKTK
HRVDTLSHESHKDKSKKKHHKDGRFEGERIPHLVRQKQYRRENSEEKEEDSKKNDDYVLE
KLFKKSGVHSVMKHDAIMEASSADHVLVEAEADRVAQDALRALKASRQQCLGAASGVPTW
TGMSGLSGAPSGIKSRFGQKRNSMLLSSHSTCASRAKKRKDADTIKKENVKKCSSNGHFD
GKSGESSSSALDSSSLLAKMRARNRLLLPQQTENEGDENYQQAPAPAPGSTECDELLVDM
RNFIAFQARMDGEASTQELLHEFESKLPAAQSCVFRELLRHLCTFHRSPNGEGVWRLKPE
FR
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagataacagccacctgccagacggcatccaagaacaaaatgtggtcactatt
tcgagcaataattgcttgcataatgctgaagaagtgggaattgaacaagaaaatggcgtt
tgtaacagtgacctgggtaacaacattagagttcccaactctgccagccagccatccact
tccatggctgctcccttggaggtgcccagaagaggacaatcccttttacagatcaacagg
cagcagattcagtccatctcacatagtgcacaggctgctgagctcaaaggtttgggagtt
gatgtctacgaccaggatgtattggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagctaataaagcagcaaaaatagccgatgcggagaaggaatatcagtcagtgctg
gatgacttaagattatgtacaacatctctgaaacaaataaataaaattattgagcaactt
tcacctcaagctgctgacaacaaagatataaacagaaaactagattctgtgaaacggcaa
aaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgtctccaggca
attcttggtggaacagagattcttgataaagtgaatgagattgaatttgaggaggatgaa
gaacctggtccatcatgtcttgggagtatgcttatgcctgttcaggaaacagagtgggaa
gagcttattcgtactggccagatgactccgtttggaactaaaatacctcagaagccagag
agaaagacacgacaattaatgctaaatgaagagtctgattttgagaagtacttagcagac
caagctaagctgtcatctgaaagaaggaagttatcccatcacaaagcagcaaagaagaaa
gcgcaggccaaaaatggtcagtgtgtagctcctgcatctactacaaaggaaaaaaggggt
aaagccctgtcaaaaacagataagcgcttaaaaaaacacatgagaagacttcagaagcat
gcccttcagattcaatcaaaggcaaagattccaaaagaatataagtaccttggggccagg
aagttcaggcgtgtacaggaggatgatagtggggagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagcagaagaggaggaacagcaggcatcttatgctgagaatgat
tctgattatgaactcaggaatttgccaagaaaaagaagatgtttggtgaagagaggtttt
aaagatgctgaagatgatgctgacttctttccaagctctgaggaagaagagcatacactg
gtgaagcgcaaagtaaagagatggagagatgacggagatgaagactgttataaacagaga
ctaaggacgtggcaaaaagaacgtttgaaggacaaagaacatcgaacagctgaagaactt
tctgaagaaagtgacactgaatttgaggagggtttcaaagtaccaggatttctcttcaaa
aagctttttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccagcag
gcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgccttc
ttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccagggc
ttgggtccaacagtgattgtttgcccagctactgtgatgcatcagtgggtaaaagaattc
cacacttggtggcctccatttagagtcgccattctccatgaaactggttcttataccagc
aaaaaggtgaaactaatccatgaaattgcttcatgccatggaattttaattacatcttac
tcgtacattcgactgatgcaggatagcatccacagctatgattggcattatgtgattctg
gatgagggtcacaaaatccgaaatccgaatgccgcagtcacacttgcatgcaagcagttc
cgcacaccccatcgaatcatcttgtctggctcccctatgcaaaacaacctaaaggagctg
tggtccctttttgactttgtgttcccagggaaattgggaacactacctgtgttcatggag
caattttctgttccaataaccatgggaggatattccaatgcctctcctgtccaggtaaaa
actgcatacaaatgcgcctgtgtgttacgggacaccataaacccctacttgctgcgaaga
atgaaggctgatgtaaaaatgagcctttcacttccagataaaaatgaacaggtcctcttt
tgccgtttgacagatgagcagcgtcaagtctatcaaaatttcatcaactctaaagaagtt
taccagattctcaatggagacatgcagattttctcaggactagtagctttgagaaagatt
tgcaaccaccctgacctcttctctggtggtcccaggattttgaagggtgtaccagatgct
gaagtggaggaagcagatcagtttggatattggaaacgttctggaaaaatgatagtagta
gaatccttgctgaaaatatggcacaagcaaggtcacagagtgttggtttttactcagtca
agacagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctcagg
atggatggcaccacaacaatagcttccagacagccccttataacgagatataatgaggac
aaatccatatttatttttcttctaacaactcgtgttggtggcattggagttaatttaact
ggtgctgaccgggttattatttatgatcctgactggaatcccagtacagacacacaggct
cgggaacgtgcttggagaataggccaaaagaaacaggtgactgtgtataggctcctcact
gcaggtactattgaagagaagatataccacagacaaatcttcaaacagttcttaacgaac
agggtgctgaaagatcctaagcagagacgctttttcaaatcaaatgatctttatgaactt
tttgctctgagcagcccagatgtgtctcaggggacagaaacaagtgcaatttttgcaggt
actggttcagatgttcaagtcccaaaacagcaattgaaacggaaatttgaaaagccacct
gataatgacacttgtaaaggtgatgtccatcttacagaaagcacctcaccgaagtacagc
aagtcatgcaattcctactcaaccactcacatgacaaattattctaaagctatagagaca
agtgaggaaaccaaaggaaattgggaaacctttgaccaaaatagctatgcaaaagataat
acacaagctgctactaacgtaaattcattgaataaaagcaaggaggacagcttggaaaga
cctgacaaatctgtgtcccagtcattgcctggtgatgcagggtcttcagagaatgccgaa
tgtctgaatgctgtggtggctgatgaagtacctggggcagctaaagcaaatgtcaaggga
gattttagccttacatgtggtgcagctggctcttgggaaaagcaggttgctacaactgaa
gatcagcaattaatcatatatcagcataataatcattataaacgtacctcaaaaacaaag
catagggtggatacactgtcacacgagagccacaaagataagtctaagaagaaacatcac
aaagatggcagatttgaaggcgagcgcattcctcacctagtgagacaaaagcaatacaga
agggagaacagtgaagagaaggaggaagactcaaagaaaaatgatgattacgtcttggag
aaacttttcaaaaaatcaggcgtacacagtgttatgaagcatgatgccattatggaagct
tccagtgcagatcatgtgctggtggaagcagaagcagacagagtggcccaggatgcctta
agagccttaaaagcctctcgacaacaatgtttaggagctgcttctggtgtgccaacctgg
acaggcatgagtggtctttcaggtgcaccatcaggaataaagagtcgttttggtcaaaaa
agaaactccatgctgctttcttcacattccacttgtgcatcacgtgcaaagaagcgcaag
gatgcagatacaataaagaaagaaaatgtaaagaagtgtagttccaatgggcacttcgat
ggaaaatctggagaatcatcatccagtgcactagactcttcatctttattggccaagatg
agggcaagaaaccgccttcttttaccacaacagacagagaatgagggagatgagaattat
cagcaagcacctgccccagccccaggttcaacagaatgtgatgaactgcttgtggatatg
cgtaacttcatcgcgttccaggcccgcatggacggcgaggctagcactcaggagctactg
catgaatttgagtccaaactgcctgcagcacagtcctgtgtctttagagaacttctccga
catctctgcaccttccataggagcccaaacggtgaaggtgtttggaggctaaagccagaa
tttcgctga
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integrated database retrieval system
