Leptosomus discolor (cuckoo roller): 104353377
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Entry
104353377 CDS
T08399
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104353377 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104353377 (MSH2)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104353377 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104353377
NCBI-ProteinID:
XP_009958244
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MGLRQGERAGGAAVPFPLRSLWSRRHGAAGAGRTAGVAAAPLRCGDRTQKLESVVLSKMN
FESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANNDMSTA
IGVVGIKLSTNDGQRVIGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGG
ETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQMNSAALPEMEKQ
VAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENPNTAQ
SLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLRRF
PDLNRLAKKFQRQAANLQDCYRMYQAINQLPSVVQALEKYEGAHQMLLLAVFITPLNDIF
SDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEKMQSFLKSAAKELG
LEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDEYI
KNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVI
LEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQTGV
IVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSL
IIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTA
LTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKESE
GEPPAKKFYSEREEGEKIIQDFLCRVKALPLTDMSEEDVKIKLKQLRNDVLAKNNSFVNE
IISRTKVTS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggactccgtcagggcgagcgagcaggaggcgctgccgtgcccttcccgctgaggtcc
ttgtggagccggcggcacggggctgccggagcgggccgcaccgcgggcgtggccgctgct
cctctccgctgtggggaccgaactcagaagcttgagagtgttgtgcttagtaaaatgaac
tttgaatcttttgtgagagatctgctgctggttcgtcattacagagttgaagtttacaag
aacaaagcagggagtaaatctatcaaagaaaatgactggtatttagcatacaagggttct
ccaggaaatcttgcccagtttgaggaagttctctttgccaacaatgatatgtcgacagcc
attggagttgtggggattaagctgtctactaatgatggacaaagagtaataggagtgggg
tatgtcgacactacactgagaaaactgagtgtctgtgagtttccagataatgaccagttc
tcgaaccttgaagctctactggttcagctaggaccaaaggagtgtgtgctaccaggagga
gagactgcaggagagatgggaaaactacgacaagtcattcagaggggaggaatcctgatt
acagacaggaagaaggcagatttcacaacaaaagatattgttcaggatctcaatcgcttg
ttaaaatcaaaaaaagaagaacaaatgaatagtgcagcattgccagagatggaaaagcag
gttgctgtttcgtctttgtcagccattatcaagtttttagagttgctgtcagatgagtct
aattttggacaattcgaactgactacttttgatcttagtcaatatatggttctagataat
gcagctgttcaagccctcaacctttttcagagttctgtggaaaatcctaatactgcacag
tctctagctggtttgctaaataaatgcagaactcctcaaggacaaagactagttaatcag
tggatcaaacaaccacttatggacaagaatagaattgaagaaaggttgaatttggttgaa
gcttttgtggtggatccagaactacgtcagtgccttcaagaagatctcttacgtcgcttc
ccagaccttaaccgtctggcaaagaaatttcagagacaagcagcaaacttacaggactgt
taccgaatgtatcaggctattaatcaactgcccagtgttgtgcaagcactagaaaaatat
gaaggagctcaccagatgttgttgttggcagtgtttataacacctcttaatgatatcttt
tctgacttctcaaagtttctggagatgatagaaacaacattggacatggataaggtggag
aatcatgaatttcttgtcaaggcttcttttgatcctaatttgacagaattaagagagaag
atgaatgaactggaagaaaaaatgcaatccttcttaaagagtgcagccaaagaactaggt
ttggaagctggcaaaagtatcaaactggagacaaattcacagtttgggcatcactttcga
ataacttgcaaagaggaaaaagttctccgtaacaattcgaagtacggaatagttgataca
cagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgatgaatatata
aagaacagagaagagtatgaagaggctcaggatgcaattgtcaaggaaatcattaacatt
gcttcaggttatgcagaaccaatacagacgatgaatgatgtgatagctcaattagatgca
attgtcagttttgctcatgtgtcaaacggagcaccagtgccgtatgtccgtcctgtcatt
ctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcattgaagtg
caagatgaggtggccttcatccccaatgacattacatttgagaagggcaagcagatgttc
cacattattactggccctaacatggggggaaaatctacctacatccgacagacaggggtg
attgttcttatggcccaaattgggtgttttgtaccgtgcgactctgcagaaataaccatt
gtggattgtatcctggctcgggtgggagctggagacagtcagctgaaaggtgtgtctact
ttcatggctgaaatgttagaaactgcttcaatccttaggacagcatctgaaaactccctg
ataattattgatgagctgggaagaggaacttctacctacgatggctttggcttagcatgg
gctatttcagaatacattgctagcaaaatctgtgctttctgtatgtttgctacacatttt
catgaactgacagctctcgctgaccaagtgccaacagtaaataacctgcatgttactgcg
ctgaccagtgatgacacgttgacgatgctttatcgtgtcaaagaaggtgtttgtgaccag
agttttggaatacatgtagcagagttggcggctttcccaaaacatgtgatagaaagtgca
agagagaaagcactggagctggaggagtttcaaaacattggcaagtccaaggaatctgaa
ggagaaccaccagccaagaaattctacagtgaaagagaggaaggtgaaaagataattcag
gattttctttgtcgagtgaaagcattgcccttgacagatatgtcagaagaagatgtcaaa
atcaagctgaaacagctgagaaatgatgtattggcaaagaacaacagttttgtgaacgaa
ataatttcccgaacaaaagttacatcatga
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