Leptosomus discolor (cuckoo roller): 104353522
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Entry
104353522 CDS
T08399
Name
(RefSeq) versican core protein-like
KO
K06793
versican core protein
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04514
Cell adhesion molecules
ldi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104353522
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104353522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ldi00535
]
104353522
00536 Glycosaminoglycan binding proteins [BR:
ldi00536
]
104353522
04091 Lectins [BR:
ldi04091
]
104353522
Proteoglycans [BR:
ldi00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
104353522
Glycosaminoglycan binding proteins [BR:
ldi00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104353522
Lectins [BR:
ldi04091
]
C-Type lectins
Lecticans
104353522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
Lectin_C
hEGF
EGF_TEN
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104353522
NCBI-ProteinID:
XP_009958420
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
HPVNEFLDLFSRHMLPHAIDEPHIDAESAQTEPCTSDSVQDSSEYIILDPFFPNFIDFEE
EEDCENTTDVTTPPALQFINGKQQVTSAPKSTKAEEARSDQIESVAHSKNVTFSQINETN
TFIISETEASGTMQPNKAGEVIGAFEVTQPTADVAMLEPVYSGESEVATTEKSIAVTSSY
EQSLQNNKDTITWHGTEESSTKDTKNSLLIISETSGDGSTESDLSSSIFSEIVTMSRKDD
EKNSGITSAPDAFTAESSAVTASPDAVFNPASVGISVKDFIPEEPTPTQEDNYRTTIKLN
VNSLVENLLETSSHTAKPEMTFIVLEGSGDVEEDITITSVITTETAVTETLSMQDTSLGS
GTVLPTETSATVSGITSALPRGISTLFSAFDRSSEVTVATISASEFITEKVVASSLVTEK
NIEDEKETQTTVYSGHENSATVAERNVELNELGSTTSEVRTVSQEPTLLRRTVLVTGTIS
SEIKRVTTVPLLKEKKLFINEGSAEEPADIFSGGPTRKVVSTDSPFIDPGSGDIDVIIES
ATLTSVPLRPVTETQTEKHEGKIYSIDGASLKNSTEYEEPASTDESTISVSSTGSDGLTK
ESGVTSQMFQDVFSTGSPGEQNQETEPTYTASSEVKSSPGSRKEILSRVASGVKTEDLGT
GEVTSSPESVVSNSPHIMVTHGTGSIKAVAESTESKNAKISSPTVSLGKILLIEHGSGEE
FKGDSSTTKLMSNGPTEEILGSTFSFIDQRSGEADTFIESFAKTAVSPTGRPETQEKYNK
KVVSTSSMDHAFTTEPVELVLSTEHEVTSVGTVTDISTEDKTIDELAVRAFSKKIPLVED
IHSGEERTREISPKATESSEESTDPSFKITQANHEHLAFLNVLTVNPYSEEKELETGSVK
KILLPFNDVTEPVKTERSYISSPVTVIEQEEDLKEEKLTDDELIGDPFFSGQGSGDSLVV
IPSVVPLAINEIMSTSSPETSYPANMGPKLSTDKTQDFERGSTESNAEVNEEVTSAVTEL
LSETEDQFPSSVTTSSPALVRERSKGFSSTEVKETMHYFVAIQEPHNKEINYTRGENERD
RTTATSKAVSQKESSHLLSKDGITPVSVILSRTPNLKTQESLVTSTTKIPGKVLPESSGE
GSGWVGVLDSSSPDMFTHLSISAGSKVEVNASSSVPGEIYSEVMTTEALTDGSQTVVTGV
PSLFTEEKEIMASPAAVQPKTATSEELTSDTGIYEKIIPMIDDKRGVVLNVSVYGDITLI
EERLQIPSEETTIIDMDHSKSMPEDIISVQTLPNPVIHSTYGSDDNMTAEGEKYDSTPKF
SITKEKTLGSGDSLSLTTSSQPSSESVTGGRGPKSDDKDLGSGNAMKFATETHITTKLSE
LGIFLPTVPSLTSPRVPHESKYVVTSTTEDTYKLNTSANSGVIAGQSETISVSGFSGMGQ
EELDDKQPVVPSFTPVLTIDTERGLTTDMLDVSIVTTQHSSQLTTVSPSKNEEKHPTVYT
NTKSVSVEYEETDSVSFYSVPQTPKSSVTVQLVNGVSDYPEVIIPSTSSSKDSDQSDHSS
EGTFKEVSSDIAATYKPPTTDLLDRTESFLLEFSLKPSSESTTTESTPHFNRLVTDRTEE
PETSVTDLAIEEEATVSGDSPSIHILPTAFLNFGERASTDIPKVSTIKVEASSERVNNPR
QEDDRSTEGEIPWLFSTPVSDSPNSIETEVFKPDQEAVTMLASSSQPLDRSTETLSAFFD
QEEITTISSNIATTSTAPGNSLYQTEQSMISSEEPNTIELITSSFSLPEVTNGSDFQIGT
SVGSVEGTAVQIPGQDPCKSNPCLNGGTCYPRGSFYICTCLPGFNGEQCELDIDECQSNP
CRNGATCIDGLNTFTCLCLPSYIGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDTAER
ECRLQGAHLTSILSHEEQIFVNRIGHDYQWIGLNDKMFERDFRWTDGSPL
NT seq
5912 nt
NT seq
+upstream
nt +downstream
nt
atcacccggtgaatgaatttttggatctgttcagtcgccacatgcttccacatgcaatag
atgaaccccacattgatgcagaatcagctcagactgaaccctgtacttcagactctgtgc
aggattcgtctgaatatataatattggatcctttctttccaaactttatagactttgaag
aagaggaagactgtgaaaatactactgatgttacaactcctccagctttgcagttcatca
atggaaagcaacaagttacgagtgcacctaagagcacaaaagctgaggaagcgagaagtg
accaaatagaaagcgttgcacactccaaaaatgtaaccttttctcaaatcaatgaaacaa
atacatttataatatctgaaactgaagcctctggcactatgcaaccaaacaaagctggag
aagtaataggggcatttgaagttacacaaccaacagcagatgttgcaatgttagaacctg
tttatagtggcgagtcagaagttgccacaacagagaaatcaatagctgttacttcttcat
atgagcagtctctgcaaaataataaagataccataacatggcatggaaccgaggagagct
ctactaaagatacaaaaaactcacttttgattattagtgaaacttctggagatggctcca
ctgagtctgatttatccagttctatcttctcagaaattgtgacaatgtcaagaaaggatg
atgaaaaaaattctggtataacttctgctcctgatgcatttactgcagaaagttctgctg
taactgcttctccggatgcagtttttaatcctgcttcagtaggcataagtgtgaaagact
ttattccggaagagccaacacctactcaagaagataattatagaacaactattaaactta
acgtaaattcccttgttgaaaaccttctggaaacaagtagtcatacagcaaagcctgaga
tgactttcatagttctagaaggctctggagatgtagaagaggacatcactataacttcag
tcataacaacagaaacagcagtgacagaaaccctttcaatgcaagatacttctttgggct
ctggcacagtattgccaacagaaacttctgcaactgtttcaggaatcacctctgctttgc
ccagaggaataagcactcttttttctgcttttgatcgaagttctgaagtaactgttgcca
ccatttctgcatctgagtttattacggaaaaagtagttgccagctctcttgtaactgaaa
agaatattgaagatgaaaaagaaacacagaccactgtttattcaggtcatgaaaattcag
ctactgttgcagagagaaatgtggagttgaatgaacttgggagcactactagtgaagtca
gaactgtaagtcaagagcctaccctgctcagaagaacagtactggtaacaggtaccataa
gttctgaaatcaaaagggtcactactgttcctctcttgaaagaaaagaagctttttataa
atgaaggatcagcagaagaaccagcagacatattttcagggggtcccacaagaaaagtgg
taagtactgactccccatttattgatccaggttctggagacatagatgttatcattgagt
ctgctactttgacttcagttccattaaggcctgtcactgaaacacaaacagaaaagcatg
aaggaaaaatttacagcatagatggtgcttcactgaagaattcaacagaatatgaagagc
ctgcaagcacagatgaatcaacaatatcagtttcaagtactgggtcagatggcttgacaa
aggagtctggagtaacaagtcagatgttccaggatgtgttcagtacaggaagcccaggag
aacaaaaccaggaaacagaaccaacttacacagcttcttctgaagtaaaatctagtcctg
gttctagaaaagaaatactatctcgtgttgcatcaggagttaaaactgaagatttaggaa
caggtgaggtcacatcatctccagaatctgtggttagtaacagccctcacatcatggtga
cacatggtactggcagtataaaagcagtagctgaatctacagaaagcaaaaacgcaaaaa
ttagttctccgactgtctcattaggcaagattctcttgattgagcatggttctggagaag
aattcaaaggggacagcagcaccacaaaactaatgtctaatggacctactgaagaaatac
ttggaagtactttctcatttattgatcagagatctggagaagcagacacgttcattgaat
cgtttgcaaaaacagcagtttcacccactgggagaccagaaacacaagagaagtataaca
aaaaagttgtcagcacatcatctatggatcatgccttcactactgaacctgttgagctag
tcctgagtactgaacatgaagtaacttcagtgggaactgtaactgacataagcacggaag
acaaaacaattgatgaactggcagtgagagccttttctaagaagattcctttggtagaag
atatacattctggggaagaaaggacaagggaaatttcaccaaaagctacagaatcttctg
aagaatcaacagacccatcctttaaaattacacaggctaaccatgaacatctggcatttt
taaatgttctgactgtcaatccatattcagaagagaaggaactagaaactggatctgtta
aaaaaatacttttgccatttaatgatgtaactgagcctgtaaagactgaaaggagttaca
taagctctccagttacagttatagagcaagaggaggacttgaaagaagaaaagctaacag
atgatgagctcattggtgatccattcttttcaggacaaggatcaggagacagccttgttg
ttattccttctgtagtgccattggctatcaatgaaatcatgagtacttcaagtcctgaaa
cgtcttatcctgcaaatatgggacccaaactttcaactgacaagacacaagactttgaaa
gaggaagcactgaatcaaacgctgaagttaatgaagaagttacaagtgctgtaactgagc
tcctgtcagaaacagaagaccagttccccagctcagtgaccaccagttccccagctttag
taagagagcgttctaagggcttcagctctactgaggttaaagagacaatgcattattttg
ttgcaattcaggaacctcacaataaggaaattaactatacaagaggagaaaacgaaagag
ataggacaacagctacttctaaagctgtttctcaaaaggaatcttcacatttgctgagta
aagatggcataactcctgtttccgtaatactgagtagaactcctaatcttaaaacacaag
aatcacttgtaacatcaacaacaaaaattccaggcaaagtgttacctgaaagctctggag
aaggatctggctgggttggtgttttggattcatcttctcctgatatgtttactcatttgt
caatatctgctgggtcaaaagtagaagtaaatgcttcatctagtgtacctggggaaattt
attctgaagttatgacaacagaggcactgacagatggatcacagactgtagtcacaggag
taccatccctttttacagaagaaaaagagatcatggcaagtccagctgctgttcaaccaa
agacagctacatcagaagaactaacaagtgatactgggatatatgagaaaattattccca
tgattgatgataaaagaggtgttgtgttgaatgtttctgtttatggtgatattacactaa
ttgaagaacgacttcaaatcccgtcggaagaaacaactattatagacatggatcactcaa
aatcaatgcctgaagatataataagtgtgcagaccttgccaaatcctgtcatacactcaa
catatggcagtgatgataacatgacagctgaaggggagaaatatgattcaacacctaaat
tttccataaccaaagagaagacattaggatctggtgatagtctttctttgactacttcca
gtcagccaagtagtgaatcagtaacaggtgggcgcggaccaaaatcagatgacaaagatt
tgggttcaggcaatgccatgaagtttgcaacagaaactcacatcactaccaaactctctg
aactgggcattttccttcctacagtgccatcactgacaagccctcgtgtgcctcatgagt
ctaaatatgttgttactagcacaacagaagacacctacaagctgaatacttcagcaaaca
gtggagtaatagcaggtcaaagtgaaacgatctctgtctctggcttttcaggaatgggcc
aagaagaactggatgataagcagcctgtggttccttcttttacaccagttttaactattg
atacagaaaggggtttgacaactgacatgcttgatgtaagtattgtcaccacacagcatt
catcccaactgacaactgtttcacctagcaaaaatgaagaaaagcatcctacagtataca
caaacacaaaatcagtatcagtagagtatgaagaaacagattcagtgagcttttattctg
tacctcaaactcctaaatcctcagtaactgttcagttagttaatggagtatctgactatc
ctgaggtaataattccaagcacatcatcatcaaaggattcagatcagtctgatcattcat
cagaaggaaccttcaaagaggttagttctgatattgcagcaacatataaaccacccacta
cagaccttcttgacagaacagagtcttttctgctggagttttctctgaagcctagttcag
aaagcacaactactgaaagtactcctcactttaatagacttgtaacagaccgaacagagg
agccagaaacctctgtaactgatttggctattgaggaagaagctactgtttctggagatt
ctccatcaatacatatcttgcctactgcttttctgaattttggagaaagagcgagcacag
atattccgaaagttagcacaataaaagttgaagcttcctcagagagagtgaacaaccccc
gtcaagaagatgacaggagtactgagggagagataccatggcttttttctacacctgttt
cagattcacccaatagtattgaaactgaagtatttaaacctgaccaggaagcagttacaa
tgctagcttcatcctcacaacctttggatagaagcacagaaacactatcagctttctttg
atcaagaggagatcacaacaatttcttctaacattgcaacaactagcactgcccctggaa
acagtctgtatcaaactgagcagtcaatgataagctctgaggaaccaaatactattgaac
ttataacttcatcattttccctgccggaagttactaatggatcagatttccagattggca
ccagtgtgggttcagttgaaggcacagcagtgcaaattccaggccaagatccatgcaaaa
gcaatccctgccttaatggtggtacctgctatccacgtggttcattttacatctgtacat
gtttgccaggtttcaacggtgagcagtgtgaattagatatcgatgaatgccagtctaacc
catgccggaatggagccacatgcatagatggcctcaatacctttacttgcctctgtctgc
caagctatataggtgctctctgtgaacaagacacggagacatgcgattatggctggcaca
agttccaaggacagtgctacaaatactttgcccatcggcgtacatgggacacggctgaaa
gggaatgccgtctccaaggagcacatttgacaagcatcttgtctcatgaggagcagatct
ttgtgaaccgtattgggcatgactaccagtggattggcctcaatgacaagatgttcgagc
gtgatttccgctggactgatggtagcccgctg
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integrated database retrieval system