Leptosomus discolor (cuckoo roller): 104353819
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Entry
104353819 CDS
T08399
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104353819 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldi04131
]
104353819 (VPS8)
Membrane trafficking [BR:
ldi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104353819 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
Clathrin
TPR_Vps41
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
104353819
NCBI-ProteinID:
XP_009958834
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
IDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSG
DRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTS
HGLALIFDQNQALRLCLSSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKL
LRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKG
EVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPL
LAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSR
TAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKAC
YQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVG
LSGDTSKRKAVIADRMVEILLRYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQR
VDLLFSQIYDKMSENSVAKGIFLECLEPYILSDKLIGITAQVMKDLLLHFQDKNRLENLE
ACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKS
LTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEV
YPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGC
LFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEE
SRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEE
KQAVWQKALEHIEELLLLSPCKAADLVAIHFSEQIESIITNLQDQFLILQFLRSLLDPRE
GINQDLIHLPPCITEQFIELLCQYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYL
LEKKGDTHAAFLVMLERLQSKLLLLTQDDESSAELPLLESIEDTLMKTIALCQRNSHNLD
QQQRESLWFPLLEAMMSPQKLSGSSQCRYSESLKSLTMQVLNNMAAFIALPSILQRILQD
PVYGKGKLGEIQGLVLGMLDTFNYEQVNFTSSSLLPFSVWSQILCSLQTSAVF
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
attgatgacaaagaatttgacattcctcaagtcgatacccctcccacactggagagcatc
ttaaatgagaccgatgatgaagaggagtcttttattttggaggatccctttctcttgaac
attgataacacggatacacactcctatgacacatcttctgtagcaagctctgacagtggg
gaccggacacacctgaaaaggaagaaaaaactcccagattctctctcactccatggatca
gttatacggctttcacttctgaaaggaatttctgcccaaatagtatccgcagcagacaaa
gtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtggggacttcc
catgggttagcactgatatttgatcaaaaccaggctcttcgtctgtgtctgagcagcact
gctgttggggcccagtatggggctatctctgctctcagtatcaacaatgactgttcgagg
ctcctgtgtggctttgcgaaaggacagatcacaatgtgggatctggccagtgggaagctg
ctacgatcaataacagatgcccacccaccaggaacagccattttgcacatcaagtttaca
gatgacccgacgcttgcaatttgcaacgacagcggaggctccgtatttgaactgtcattt
aagagggttatgggagtgaggacctgtgagtctcgatgtctcttcagtggctcaaaggga
gaggtttgctgtattgaaccattacatgcaaaagttgagctgagagaccatcctatcacc
cagtattcactgctggccatggcctccctaacaaagatactggttattggcctgaagcca
tctctgaaagtgtggatgacctttccctatggtcgtatggacccttctagtgtccctctt
ctggcatggcactttgtggctgtacagaattctgtgaaccccatgcttgcattttgtcga
ggagatgtcgttcattttcttctggtaaagagagatgatactggtgcaatacatgtcact
aagcagaggcagcttcatctacactatgaccttatcaactttacttggataaactcacgg
acagcagtgcttctggacagtgtggagaagctgcatgttatagatcgtcagacacaggag
gagctggaaaccatagagatctctgaagttcagctagtctacaacagcagccacttcaaa
tcgctggctacgggaggcaatgtcagtgaagccctggcattggttggagagaaagcttgt
tatcagtccatcagcagctgtggtggtcagatcttttaccttggaactaagtctgttcat
gtcatgacattgagaagctggagagagagagttgaccaccttctgaaacaagagcgtctc
actgatgccctggctctagcttggtctttttatgaaggaaaagcaaaggctgtagtaggc
ttgtctggtgacacaagcaagcggaaagcggtcattgcagacagaatggttgaaatcctt
ctgcgttatgctgatcggacgttgaagaaatgtcctgaccaaggcaaaatccaggttatg
gagcaacattttcaggacgtggtgcctgtcatagttgattactgtctcttactccagcgt
gtggatctattatttagccagatatatgataagatgagtgagaattctgtagcaaaaggc
atctttctggagtgcttggagccatatatcttaagtgataagctgataggaatcacagct
caagtgatgaaagacttactgcttcacttccaagacaaaaacagattggaaaatttggaa
gcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagttcttctatgc
tgggaaaaccatctttatgatgccatgatctacgtctacaatagtgggatgaatgacttc
attagtcccatggagaagctgttcaaggtcattgctcctccactgaatgctgggaagtct
ctcacagatgagcaggtggtaatgggcaacaagctgcttgtgtatataagctgctgcttg
gcaggccgtgcatatccattgggcgatattcctgaagatctggtacctttggttaaaaat
caggtctttgaatttctcatccgcctgcattcaactgagggatctgtggatgaagaggtc
tacccttatgttcgtaccttgctgcacttcgacactcgggaattccttaatgttcttgct
ctgacttttgaagactttaagaatgacaagcaagctgtggaatatcaacaaagaattgtg
gatatacttctgaaagtcatggtagagaattctgacttcaccccatcgcaggttggctgt
ctctttaccttccttgcccgtcagcttgccaagcccaacaacacgttgtttgtgaacagg
acgctttttgaccaggtccttgaatttctgtgcagtccagatgatgactcccgccattcg
gagaggcaacaggtccttttagaattgctccaggcgggagggatagtacagtttgaagag
agccgtcttatccaaatggcagaaaaagctgaattctatcagatttgcgagttcatgtat
gaacgagagcttcgctatgacaaaataattggctgttacctgcgtgatccagtgagaaag
gaagaagttttcaattatattcacaacatcctgtccatgcctggctacagtgctgaagaa
aagcaggcggtgtggcagaaagctttggaacatatagaggagttgctgttgctgagcccg
tgcaaagcagccgacttggtagccattcacttcagtgagcagattgagagcatcattaca
aaccttcaggaccagttcttaatcttgcagtttctgaggagtctccttgatcccagagaa
ggcattaaccaagacctgatacacttaccaccctgcatcactgagcagttcattgagctg
ctatgtcagtacagcccagaccaggttttggagacgcttaaagttctagaatactgcaga
ctggaagaaaccatccagataacccagaaacatcagctccatgaagcttcttcatattta
ctggagaagaagggagatacacatgctgcgtttttggttatgcttgagcgattgcagagc
aagttgctgttgcttacacaagatgatgaaagctcagctgaactccccttgctagaaagc
attgaagataccttgatgaaaacaattgccctttgccagagaaattcacacaatttagac
cagcaacagcgagagtccctctggtttcccctgctggaggctatgatgtccccacagaaa
ttatctggttcttcacagtgtcgatactctgaatctttaaagagcttgacaatgcaagtg
ctgaacaacatggctgcatttattgctcttccttcaatcctgcagagaattctacaggac
ccagtttatggaaaagggaaacttggagaaattcaaggacttgtcctgggaatgctggac
acttttaactacgaacaagtaaatttcacctctagctcactcctgcctttttctgtctgg
tctcaaatcctatgcagtctccaaacttcagcagttttctaa
DBGET
integrated database retrieval system
