Leptosomus discolor (cuckoo roller): 104354282
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Entry
104354282 CDS
T08399
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03030
DNA replication
ldi03420
Nucleotide excision repair
ldi03430
Mismatch repair
ldi03440
Homologous recombination
ldi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104354282 (RPA1)
03420 Nucleotide excision repair
104354282 (RPA1)
03430 Mismatch repair
104354282 (RPA1)
03440 Homologous recombination
104354282 (RPA1)
03460 Fanconi anemia pathway
104354282 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ldi03000
]
104354282 (RPA1)
03032 DNA replication proteins [BR:
ldi03032
]
104354282 (RPA1)
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104354282 (RPA1)
Transcription factors [BR:
ldi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104354282 (RPA1)
DNA replication proteins [BR:
ldi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104354282 (RPA1)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104354282 (RPA1)
MMR (mismatch excision repair)
104354282 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104354282 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
104354282
NCBI-ProteinID:
XP_009959457
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLSAQ
CVCQVNRFIVNSLKDGRRVVILMDVDVLKTADKVGGNIGNPVPYNEGQGQQRYSAPAANP
APSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASAPSSVKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSISDLENTPKDSI
VDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAS
GANTNWKTLFEAKAENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQNAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLIASIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaacgtctccaagcccgtgctgcaagtgatcaatacacgggctattgct
acaggaaacgggccaccacgttaccgagtgttgatgagtgatggggttaacacactctcc
tcattcatgttggcaacacagctgaaccctctggtggaagaggaacgcttatcagcccag
tgtgtctgccaggttaacaggttcattgtcaacagcctgaaagatggaaggagagtggtg
atactgatggatgtagatgttctgaagacggctgataaggttggtgggaatattggcaac
ccagtgccgtacaatgaagggcaagggcagcaacgttattcagctccagcagccaacccg
gcacccagcaaaccacagcaacagaatggcaatttgtcagtggcaggtcctgctgctccc
aagtaccatgctccctcaaaccagtttggtaaagcaagtgctcccagttctgtgaagaca
ccagggggatcgcaggccaaagtagtgccgattgccagcttgaacccgtaccaatccaag
tggaccatttgtgctcgtgttacccaaaaaggccagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttttctatagagcttgttgatgaaagcggcgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgaatttgtatccatctctgacttggagaacacacccaaagactcaatc
gttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtgaaagct
aacaatagggaggtatcgaagaggaacgtgcatctgatggatacatcagggaaactggtg
acagctacgctatggggaaatgaggctgaacagtttgatggttctagacaacctgtgata
gccatcaaaggagccagagtctctgattttggtggtagaagcctgtctgtcctgtcctca
agtacggttgtcatcaaccctgatagcccagaggcttttaagctccgaggatggtttgac
tctgaggggcagcttctggaatgtgcctcaatctctgatgtgaggggtgggccagcatct
ggagcaaacaccaattggaaaactctgtttgaagccaaagctgagaacttgggacaagga
gataaggcagattattttagctgtgtgggcacagttgtacatctgcgcaaagagaactgt
atgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaaaatgga
ctgtatcgttgtgaaaagtgcgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctggtgaccattgcagactgtctagagtaccagtgggtgacttgtttccaagagtcagca
gaattcattctcgggcaaaacgcagctttcctgggagaactgaaggaaaagaacgagcag
gcatttgaagaggtgttccaaaatgcaaacttcaacacgtacgagttcaggatccgagta
aaactggagacttacaacgatgaatctcgtattaaggctacagcagtggatgtcaaacct
gtgaactacagagaatacagcaagaggttgatcgcaagcatcaggagaaatgctcagctg
gggtga
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integrated database retrieval system
