Leptosomus discolor (cuckoo roller): 104354580
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Entry
104354580 CDS
T08399
Name
(RefSeq) LOW QUALITY PROTEIN: pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ldi04030
]
104354580
G protein-coupled receptors [BR:
ldi04030
]
Rhodopsin family
Vision
Opsin
104354580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srv
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
104354580
NCBI-ProteinID:
XP_009959838
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MYSSNSSQEPPNNGTPGPFDGPQWPHQAPRGMYLSVAVLMGTVVVSASVANGLVVVVSIR
YKKLRSPLNYILVNLAVANLLVTLCGSSVSFSNNINGFFVFGKEMCELEGFMVSLTGIVG
LWSLAILAFERYVVVCRPLGDFRFQHRHAISGCAFTWSWSLLWTTPPLMGWSSYVPEGLR
TSCGPNWYTGGSNNNSYILALFVTCFVMPLSLILFSYTNLLMTLRAAAAQQQEXXXXXXX
XXXXXXMVITMVMAFLICWLPYATFALVVATNKDIAIQPALASLPSYFSKTATVYNPVIY
VFMNKQFQSCLTKMVCCGQRPWGTGKTAPAAPSPRAGIAADGLRNKVTASQPV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtactcctccaacagctcgcaggagcccccaaataatgggacccccgggcctttcgat
ggcccccaatggccccaccaggccccgcggggcatgtacctgtcggtggccgtgctgatg
ggcacggttgtggtctccgcctcggtcgcaaatggcttggttgttgtggtttccatcagg
tacaagaagctccggtcccccctgaactacatcttggtgaacctggccgtggccaacctg
ctggtgacgctctgcggcagctctgtcagcttctccaacaacatcaatggcttcttcgtg
ttcggcaaagagatgtgcgagctggagggcttcatggtctccctgacaggcatcgtgggg
ctgtggtccctggccatcctggcctttgagcggtacgttgtggtctgcagacccctggga
gactttcggttccagcaccgacatgccatcagtggctgcgccttcacgtggagctggtca
ctgctctggacaaccccaccgctcatgggctggagtagctatgtacctgaaggtctgaga
acctcctgtgggcccaactggtacaccggcggcagcaacaacaacagctacatcttggcc
ttgttcgtcacctgcttcgtgatgcccctcagcctgattctcttctcctacaccaacctg
ctgatgaccctgcgagcggctgcggcacagcagcaggaannnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnncatggtgatcacaatggtgatggccttcctcatctgctggctg
ccctacgccacatttgccctggtggtggccaccaacaaagacattgccatccagccagct
ctcgcatccctgccctcctacttctccaagaccgccacggtttacaatccagtcatctac
gtcttcatgaacaaacagttccagagctgcctgacgaaaatggtgtgctgtggtcagcgc
ccctgggggacgggaaagactgctccagctgcccccagcccccgcgcaggcatcgctgca
gatgggctgcggaacaaggtgacagcgtctcagcccgtctaa
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