Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1087
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Entry
LBU_1087 CDS
T01957
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ldl
Lactobacillus delbrueckii subsp. bulgaricus 2038
Brite
KEGG Orthology (KO) [BR:
ldl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldl03032
]
LBU_1087
03400 DNA repair and recombination proteins [BR:
ldl03400
]
LBU_1087
Enzymes [BR:
ldl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBU_1087
DNA replication proteins [BR:
ldl03032
]
Prokaryotic type
DNA Topoisomerases
LBU_1087
DNA repair and recombination proteins [BR:
ldl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBU_1087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
ADY85272
LinkDB
All DBs
Position
complement(1131573..1133756)
Genome browser
AA seq
727 aa
AA seq
DB search
MPATAKEDKSKSSKKTTATTAAKKSSPKRKKSKVKKDLVIVESPAKAHTIEKYLGRKYRV
IASKGHIRDLPKSQMGVDIDHDYQPKYISIRGKGDTIKELKAEAKKANKVYLASDPDREG
EAIAWHVAHVLGLDEKEANRVTFNEVTKDAVKDAFNHARTIDMDTVNAQQARRVLERLVG
YSMSPNLWSKVDKGLSAGRVQSVALKLVIDREKEIKAFKPVEYWTIDAEFAKGKDKFQAS
FYGEEGKKTELPNNEAVQKLLAKFDKKQPFTVSKVVKREVRRQPAAPFTTSTMQQEANRR
LNFRTSKTMNIAQHLYEGISLGKEGTVGLITYMRTDSKRISPVARQEAAQFIVEEYGSDF
AVKKERHFKNQGDAQDAHEAVRPTSVYRTPKSLEKVLTKDELRLYTLIWSRFVASEMTPA
VFDTVRYDLTQNGVTFRASGSVMKFAGYTKVYDNRSEKNVALPALEEGDEVKLTKSDSKQ
HFTQPPARYTEASLVRALEENGVGRPSTYAPTIQNIQSRNYVKLEGRAIVPTELGEIVDG
LVEQFFPDITSVDYTAKLEDELDEVEEGKKDWVSVVDQYYKPFSKELEKADSEIQKIQIK
DQPAGFDCEVCGAPMLVKMGRYGKFYGCSRFPDCRHTQTIVKKVGVTCPKCGEGEVLEKK
SKRGRKFYGCSRYPDCDFVSWDKPISRVCPHDGHFLVEKKRKDGMVVLCPNGDYKEEPRE
EQGEAAE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctacagcaaaagaagataaaagcaagagcagtaaaaagaccacggcgaccacg
gctgccaagaagagcagcccgaagcggaaaaagagcaaggtgaaaaaagacctggttatc
gtggaatctccagccaaggcccacactatcgagaagtacctgggccggaagtaccgcgta
atcgcctctaaagggcacatccgggacttgcccaagtcccagatgggggtcgacattgac
cacgactaccagccaaaatacatctccatccgtgggaagggtgacaccatcaaggaactg
aaggctgaagccaagaaggccaacaaagtctacctggcttccgaccccgaccgggaaggg
gaagctattgcctggcacgtggcccacgttttaggcctggacgaaaaagaagccaaccgg
gtgacctttaacgaagttaccaaggacgcagtcaaggatgccttcaaccacgcccggacc
atcgatatggacacggtcaacgctcagcaggcccgccgggtcttggaacgcttggtcggc
tactctatgtcgccgaatctctggtccaaggtcgataaggggctgtcagccggccgggtg
cagtcagttgccttgaagctggttatcgaccgggaaaaggaaattaaggccttcaagccg
gttgaatactggacgattgacgctgaatttgccaagggcaaggacaagttccaggctagc
ttttacggcgaagaaggcaaaaagacggaattgccaaataacgaggccgtccagaagctg
ctggctaagtttgacaagaagcagccgtttacggtcagtaaggtagttaaaagagaagtc
cgccggcagccagccgcgccgtttaccacttccaccatgcagcaggaagccaaccggcgg
ctgaacttccggacttcaaagaccatgaacattgcccagcacctgtatgaagggatcagc
ttgggcaaggaaggcacggtcggtttgatcacctacatgaggactgactccaagcggatc
tcaccagttgcccgccaggaagcagctcagttcatcgttgaggaatacggcagcgacttc
gcggtcaagaaggagcgccacttcaagaatcaaggcgacgctcaggatgcccacgaagct
gtccggccgaccagtgtctaccggacaccgaagtccctggaaaaggttttgaccaaggat
gagctccgcctttataccttaatttggagccgttttgtggctagtgaaatgactccggcc
gtctttgacacggtccgctatgacttgacccaaaatggggtgaccttcagagccagcggg
tcagttatgaagtttgccggctacaccaaggtttatgacaaccggagtgaaaagaacgtg
gccctgccagccctggaagagggcgacgaggtcaagctgaccaagtcagacagcaagcag
cacttcacccagccgccggcccgctatactgaagccagcctggtccgggctctggaagaa
aacggggttggccggccgtcaacttacgcgccgaccatccagaatatccagtcccggaat
tatgtcaagctggaagggcgggcaatcgtgccaactgaactgggggaaatcgtcgacggc
ttggttgagcagttcttcccggacatcaccagcgttgactacacggccaagctggaagat
gaactcgatgaagtcgaagaaggcaagaaagactgggtcagtgtggttgaccagtactac
aagccattctccaaagaactggagaaagccgacagcgagatccagaagatccagatcaag
gaccagccagctggctttgattgtgaagtctgcggggccccgatgctggtcaagatgggc
cgctacggcaagttctacggttgttcccgtttcccggactgccgccacacccagaccatc
gtcaagaaggtcggcgtgacttgtccgaagtgcggggaaggcgaagttctggaaaagaag
tccaagcggggccggaaattctatggctgttcccgctatccagactgcgactttgtttcc
tgggacaagccgatcagccgggtctgcccgcacgacggccacttcctggtcgaaaagaag
cgcaaggacggcatggtcgtcctctgcccgaatggcgactacaaggaagagccaagagaa
gaacaaggcgaagcagccgaataa
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