Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1146
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Entry
LBU_1146 CDS
T01957
Name
(GenBank) DNA polymerase III alpha chain
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ldl
Lactobacillus delbrueckii subsp. bulgaricus 2038
Pathway
ldl03030
DNA replication
ldl03430
Mismatch repair
ldl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBU_1146
03430 Mismatch repair
LBU_1146
03440 Homologous recombination
LBU_1146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldl03032
]
LBU_1146
03400 DNA repair and recombination proteins [BR:
ldl03400
]
LBU_1146
Enzymes [BR:
ldl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBU_1146
DNA replication proteins [BR:
ldl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBU_1146
DNA repair and recombination proteins [BR:
ldl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBU_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
DEDDh_C
HHH_3
zf-C2H2_ZNF462_11
RNase_H_2
T2SSK
zf-C2H2_7th_ZNF462
DUF6513
Motif
Other DBs
NCBI-ProteinID:
ADY85331
LinkDB
All DBs
Position
complement(1199068..1203405)
Genome browser
AA seq
1445 aa
AA seq
DB search
MTDKNQLFLKLLKQVGFSAGGADEAVLQAGEIKNVDVYRKERRWDIHVFFTTPLRFESYN
ALNQAIKHEFNDFVDTRLIVETADGQQQYLPDYWQYAVENSEVLSANPAAQNFLVGQAPH
EDSGRWVIPINGQLFDKMLEQRLLDSFSLELRDYGFFNVKLLTEVTDQSGQSDFESLAQL
VEAHEKNMQEAFQQAPAKPKPAPRPSYQGRRGKKTSFGPGAISDKAEITQLKDLSEDQRS
AVVEGHVFKAEMQELRSGSFIFYGEMTDYTGSISFKKFVRDSDKEEIEYLKGIKPGVWIR
MQGSLKDDQYAHDLIFNIYSMELTEHVSRQEAYQGEEKHVELHVHTNMSQLDATSDVADI
IKTAKKFGQPAVAITDHAGLQALPNAFEAGKKTGMKVIMGLEANMVEDHGLLVLNPASMK
YEDQEFVIFDVETTGLSSVYDTIIEIGAVKMKNGEVIDRFDKFINPHHPLSETTINLTSI
TDEMVQAADDEAVVIKQFMDFYGNDPLCGHNVQFDVGFVDAALKRCGYPEISQPVVDTLE
VSRLLHPEQSRHTLDSLCRKYNVPLEHHHRANQDAEATGYLMFKLLDAFNDKYQEDDLGK
MNDYSNGEGYKRARPTHITVLAQNQKPGLRNLYELVSLAGIKYNFKGLRTPKSELRRLHA
GLLYGSACSQGEVFIAMMQKGYEEAKKKAEFYDFLEIQPPSNYSSLIADGLIADEAQLEE
ILTNIYKLGKELNKPVVATSDAHYIDKHEAIYRDVLLAAQRGNPNRNKQHPDLHFYTTQE
MLDEFSFMGEDIAKEVVISNPNKINAMIDEGVQPVQDESFPPKIPHTAERVRKLTYDKAH
ELYGDPLPDNIQARLDRELDAIIGNGYGVVYLISQMLVAKSVKDGYLVGSRGSVGSSLVA
TMMGITEINPMPPHYRCPKCKQSEFFENGEYASGFDLPDKKCPDCQVMMVKDGQNIPFET
FLGFHGDKVPDIDLNFSGDYQPVAHNFIRVMFGPNHSFKAGTVGTLADKKAIGYVKHYQD
EHPEIKMNNAEVDRLAIGVTGVKATTGQHPAGIVVLPDDKDIYELTPLQYPSDDISKEWK
TTHFDFHQIHDNLLKFDILGHQDPTMIRMLQDLSGIDPLTIPTDDPKVMSLFSSPEALGV
TPEQINSKTGTLGLPEFGTPFVRGMLEETKPSTFAELLQISGLSHGTDVWLGNAEELINN
GTCKLKSVIGCRDNIMTDLIRWGVKEEVAFSTMETVRKGKGISDENMAVLKENKNIPDWY
IPSCLKIKYMFPKAHAAAYILMALRVAWFKVYYPEIYYAAYFSVRADKVDLEAMSRGKNT
VVALINRIKEKGTAATKLEKDLQTYMELVNEAIERGINFKMVDINESEATTYKIVDKHTI
LAPFNAVDGLGDSAAKQIVAARSEAPFLSKEDLQVRGKVSQKIMDFFENNNVLEGMPDQN
QLSLF
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gtgactgataaaaaccaactttttctcaaattgttaaaacaagtcggcttttcggcaggg
ggagctgacgaagcggttttacaggcaggggagataaaaaacgtggatgtctacagaaaa
gaacgtagatgggatatccacgttttttttactactccactgcgttttgaaagctacaat
gccttgaaccaggcaattaagcatgaatttaatgactttgttgatactcggctcatagtt
gaaacggctgatggccagcagcaatacctgccagactactggcagtacgcggttgaaaat
tcagaagtcttgtccgccaatccggcagcccagaacttcctggtcgggcaggcgccccat
gaagatagtggccgctgggttattccaatcaatggccagctttttgacaagatgctggag
cagcggctcttggacagcttctctttagagctgcgcgattacggcttctttaacgtcaag
cttttgacggaagttactgaccagagcgggcaaagcgactttgaaagcctggcccagctg
gtggaagcccatgagaagaacatgcaggaagccttccagcaggccccggccaagccaaag
ccagctccccggcccagctaccagggccggcgggggaagaagaccagttttggcccaggc
gccatcagcgacaaggcagagattacccagttgaaagacttgtcagaagaccagcgcagc
gcggttgttgaaggccatgtcttcaaagcggaaatgcaggaactgcggtcgggctccttt
attttttacggggaaatgactgactataccggttctatttcttttaagaagttcgtccgt
gattccgacaaggaagaaatcgaatatttgaaaggcattaagcctggtgtctggatccgc
atgcagggcagccttaaggatgaccagtatgcccatgacttaatcttcaacatctacagc
atggaattaaccgagcacgtgagccggcaagaagcctaccaaggtgaagaaaagcatgtg
gaattgcacgtccacaccaacatgagtcagctggacgcgactagcgatgtagcagacatc
atcaagacagccaagaagttcggtcagccggccgtcgccatcactgaccatgctggcctg
caggccctgccgaatgcttttgaagcgggcaaaaagaccgggatgaaggtcatcatgggc
ctggaggccaacatggttgaagaccacggcctgctggttttaaaccccgccagcatgaag
tatgaagaccaggaatttgtcattttcgacgttgaaacgaccggtctgtcttctgtttac
gatacgattatcgaaatcggggcggtcaagatgaaaaacggtgaagttatcgaccgcttt
gacaagttcatcaaccctcaccatccattgtctgaaactacgattaacttgacttcaatt
acggacgagatggtccaggcggctgacgacgaagctgtcgtaattaagcagttcatggac
ttttacggcaatgacccgctctgcgggcacaatgtccagtttgacgtgggctttgttgat
gcggccttgaagcgctgcggttacccggaaatcagccagccggtcgtcgacactttggaa
gtttcccgcctcctgcacccggaacagtcccgtcacactctagattcgctttgccgcaag
tacaatgtgcccctggagcaccaccaccgggccaaccaggacgctgaagcaaccggctac
ctgatgttcaagcttttggatgcctttaacgacaagtaccaggaagatgacctgggcaag
atgaacgactacagcaacggggaaggctacaagcgggcccggccgacccatattacggtc
ttagcccagaaccaaaagccaggcctgcggaatttatatgaactggtctccctggccggg
atcaaatacaacttcaaggggctgaggacccctaagtcagaactccgccgcctgcacgcc
ggccttttgtacgggtctgcctgcagccagggggaagtctttattgccatgatgcagaag
ggctatgaagaagccaaaaagaaggcggaattctacgactttttggaaatccagccgccg
tcaaactactctagcttaattgccgatggcttgattgctgatgaagcccagctggaagaa
attctgaccaatatttacaagctgggcaaggagctgaacaagccggtcgtggcaactagc
gatgcccactacattgacaagcatgaagccatctaccgggacgtattgctggctgctcaa
aggggtaacccaaaccgcaacaagcagcaccctgacttgcacttctataccacccaggag
atgctggatgaattcagcttcatgggcgaagacattgctaaagaagtggtcattagcaac
ccgaacaagatcaatgccatgatcgatgagggagtgcagccggtccaagacgaaagcttc
ccgccaaagatcccgcatacggctgaacgggtacgcaagctgacctatgacaaggcccac
gaactttatggtgatcctttgccggacaatatccaggcccgtctggaccgggagctggat
gccattatcggtaacggctacggggttgtttacctgatttcacagatgctggtggccaag
tcagttaaggacggctacttggttggctcccggggttccgttggttccagcctggttgcc
accatgatgggtatcactgaaatcaaccctatgccgcctcactaccgctgcccgaagtgc
aagcagtcagaattttttgaaaacggcgaatacgcttccggttttgacctgccggataaa
aagtgtcctgactgccaggtcatgatggttaaagacgggcagaacatcccatttgaaacc
ttcctgggcttccatggtgacaaggtgcccgacatcgacttgaacttctctggtgactac
cagccagttgcccataatttcatcagagttatgtttgggccaaaccactcctttaaggcc
ggcaccgtaggtaccctggctgataaaaaggcgattggctatgtcaagcactatcaagac
gagcacccggaaatcaagatgaacaacgcggaagttgaccgcttggccattggggttacc
ggggtcaaggccacgaccggccagcacccggccgggatcgtcgttttgccggatgacaag
gacatctatgaactgactcccctgcagtatccctcagacgatatctccaaggaatggaag
acgacccactttgacttccaccagatccacgacaacctcttgaagttcgacatcctgggt
caccaggacccgaccatgatcagaatgctgcaggacttgtccgggattgatcctttgacg
attccaactgatgaccctaaggtcatgtcccttttctccagcccggaagccctaggcgtt
actccagagcagatcaattccaagaccgggaccctgggcctgccggaattcgggaccccc
tttgtccggggtatgctggaagagaccaagccgtcgacctttgccgagcttttgcagatt
tccggcctgtcacacgggacggacgtctggctaggcaatgccgaggaactgatcaacaac
ggcacttgcaagttaaagagcgtgatcggctgccgggacaacatcatgactgacttgatc
cgctggggagttaaggaagaagttgccttttcaaccatggaaactgtccggaaggggaag
gggatttctgatgagaacatggccgtcttaaaggaaaataagaacattcctgactggtat
attccgtcttgcttgaagatcaagtacatgttcccgaaggcccacgcggccgcctacatc
ttgatggctctccgggtggcttggttcaaggtctactatccagagatctactatgccgcc
tacttctcagtcagagccgacaaggtcgacctggaagccatgagccggggcaagaacacg
gttgtggccttgatcaaccggatcaaggaaaaagggacggcagcgaccaagctggaaaag
gacctgcagacctacatggaactggtcaacgaagccattgagcgggggatcaacttcaag
atggtcgacatcaacgagtctgaagctacgacttacaagatcgtggacaagcacaccatt
ctggcaccgtttaacgccgttgacggcttaggtgactccgcggccaagcagatcgtggct
gcccgaagtgaagcgccatttttgtcaaaggaagacctgcaggttcgtggcaaggtttcc
cagaagatcatggacttctttgaaaacaacaatgtcttagaggggatgcctgaccagaac
caactttccctcttctaa
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integrated database retrieval system
