Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1297
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Entry
LBU_1297 CDS
T01957
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ldl
Lactobacillus delbrueckii subsp. bulgaricus 2038
Pathway
ldl03030
DNA replication
ldl03410
Base excision repair
ldl03420
Nucleotide excision repair
ldl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBU_1297
03410 Base excision repair
LBU_1297
03420 Nucleotide excision repair
LBU_1297
03440 Homologous recombination
LBU_1297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldl03032
]
LBU_1297
03400 DNA repair and recombination proteins [BR:
ldl03400
]
LBU_1297
Enzymes [BR:
ldl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBU_1297
DNA replication proteins [BR:
ldl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBU_1297
DNA repair and recombination proteins [BR:
ldl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LBU_1297
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBU_1297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
XPG_I
DUF6240
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADY85482
LinkDB
All DBs
Position
complement(1361590..1364250)
Genome browser
AA seq
886 aa
AA seq
DB search
MNKKLLLIDGNSVAFRAFFAMYQQLDKFKNPEGLHTNALYAFKNMLDVVLKQEDPSHILV
AFDAGKTTFRTAMYKDYKGGRDKAPAELSEQFPYLREMLKDMGIKSYELANYEADDIIGT
MAKKGAEAGYEVAVVSGDKDLTQLASDHVTVYVTKSGVTKLEAFTPDHMKEVNGVTPTEF
IDMKALMGDPSDNYPGVAKVGPKTASKLIQEYGSVENLYDHVDEMKKSKLKENLIAGKDN
ALLGKKLATIKCDSPVEVTLDDLSYEGSNVDDLRRFYEKMNFRRFLADLAQKGELTENKT
EVKKQDYVVLSADNLDQLPKAAEVTFYLAMFGDNYHLADFAGFALKIGGETFVSRDVFLL
QESPLKEMLEDSAVQKNVFDLKRTTYGLYRLGIKAEGLSFDLLLASYLVDNEKNSNDLGE
LVQGYDYYDLKTDLEVYGKGKNAKIPADDAVFFNHLAGKTAAIAALKDSLLKQLKDHEQD
DLYDSIELPTARVLAKMEMNGIKVQPSRLKELENDFAVRLKELEEKIYKEAGEEFNLNSP
KQLGVILFEKLGLPVIKKTKTGYSTSVEVLNQLKEQSPVVSDILEYRQISKIQSTYVKGL
LDVIDERDGRIHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSSPDGYIYS
CDYSQIELRVLAHVSADPNMQEAFKTGYDIHAHTAMKIFHLSSVDEVTSLQRRRAKAVNF
GIVYGISDYGLSKNLDISRKQAKEFIDEYFDQYPGIQAYMDWAVKDAREKGYAETIMHRR
RYLPDIHAKNFNVRSFAERTAINSPIQGSAADIMKIAMINMQKKLDELGLKTKMVVQVHD
ELIFDVPADELETIQKIVPSVMQAAVKLDVPLVADASWGHDWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagttacttttaatcgatggcaattccgtggccttccgggcttttttcgcc
atgtaccagcagctggacaagtttaagaatccagaaggtctccacaccaacgccctctat
gcctttaagaacatgctggacgtggtcttgaagcaggaagacccaagccatatcctggtg
gcctttgacgctggcaagaccaccttcagaaccgccatgtacaaagactacaagggcggc
cgggacaaggctccggcagaactttccgaacagttcccttacctgcgggaaatgctcaag
gacatgggaatcaagagctacgaactggccaactatgaagccgacgacatcatcggcacc
atggctaaaaaaggagccgaagccggctatgaagtggccgttgtttccggggacaaggac
ttgacccaattggccagtgaccatgtcaccgtctacgtgaccaagtccggggtaactaaa
ctggaagccttcactccagaccacatgaaagaagtcaacggggtgaccccgactgagttc
atcgacatgaaggctttgatgggtgacccgtccgacaactacccaggcgtggccaaggtc
ggccccaagactgcctctaaattgatccaggaatacggcagcgtggagaacttgtatgac
cacgttgatgaaatgaagaagtccaagctgaaggaaaacctgatcgccggcaaggacaat
gcccttttgggtaaaaagctggccaccatcaagtgcgacagcccggtggaagtgaccctt
gatgaccttagctatgagggcagcaatgtcgacgacctccgtcgcttctacgaaaagatg
aacttccgccgctttctggccgacttggcccaaaaaggggagttgactgaaaacaagacg
gaagttaaaaagcaggactatgtcgtgctcagtgctgataacttagaccagctgccaaag
gctgctgaagttactttctacctggccatgtttggcgacaactaccacctggctgacttc
gccggctttgccttgaaaatcggcggggaaactttcgtcagccgggatgtcttcctcttg
caggaaagtcccttaaaagaaatgttggaagattctgccgttcaaaagaacgtctttgac
ttaaaacggaccacttacggcctctaccggctggggattaaggctgaaggcttgtccttt
gacctgctcttggcttcttacctggttgacaatgagaaaaattccaacgacctgggtgaa
ctggtccaaggctacgactactatgacttaaagaccgacctggaagtctacgggaagggg
aagaatgccaagattccggcagatgacgcggtcttcttcaaccacctggctggcaagacc
gcggcgatcgcggctttgaaggacagtcttttaaagcagttaaaagaccatgagcaagat
gacctctacgattcaatcgaactgccaacggccagagtcctggccaagatggagatgaac
gggatcaaggtccagccttcccgcttgaaggaactagaaaacgactttgctgtccgttta
aaggaactggaagagaagatctacaaggaagccggggaagaattcaacctgaattcacca
aagcagctgggggtcatcctctttgaaaagctgggcttgccagtcatcaagaagaccaag
accggttactccacttcagttgaagtcttgaaccaattgaaagaacaaagcccggttgtc
agtgacatcctggaataccggcagatttccaagatccaatcaacctacgttaagggcctc
ttagacgtcatcgatgagcgtgacggccgcatccacacccgctacctgcagactttgacg
gcaactggccgcctgtcttcagttgaccctaacttgcagaacatcccaaccagaacggaa
gaaggtaagcagatcagaaaggcttttgtcccatcaagtccggatggctatatctactcc
tgcgattactcccaaatcgagctccgggtcctggcccatgtctcagccgacccgaacatg
caggaagccttcaagaccggctacgacatccacgcccacacggccatgaagatcttccat
ttaagcagcgttgacgaagtaacgtctttgcaaagacggcgggccaaggcggtcaacttt
gggatcgtctacgggatctctgactacggcctctccaagaacctggacatctcccgcaag
caggccaaggaattcatcgacgaatactttgaccaatacccaggcattcaggcctacatg
gactgggctgttaaagacgccagagaaaagggctacgcggaaaccatcatgcaccgccgc
cgctacctgccagatatccacgctaagaactttaatgtccgctctttcgcggaaagaacg
gcgatcaactccccaatccaagggtcagccgcggacattatgaagattgccatgatcaac
atgcaaaagaagctggatgaactgggattaaagaccaagatggtcgtccaggtccacgac
gaattgatctttgacgtaccagctgatgaactggaaacgatccagaagattgtcccgtca
gtcatgcaggcagctgttaagttggacgtgcctttagtcgctgacgccagctggggccat
gactggtatgaagcaaagtag
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