Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_1369
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Entry
LBU_1369 CDS
T01957
Name
(GenBank) RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ldl
Lactobacillus delbrueckii subsp. bulgaricus 2038
Brite
KEGG Orthology (KO) [BR:
ldl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldl03019
]
LBU_1369
03009 Ribosome biogenesis [BR:
ldl03009
]
LBU_1369
Enzymes [BR:
ldl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBU_1369
Messenger RNA biogenesis [BR:
ldl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBU_1369
Ribosome biogenesis [BR:
ldl03009
]
Prokaryotic type
rRNA helicases
LBU_1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADY85554
LinkDB
All DBs
Position
complement(1436198..1437559)
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AA seq
453 aa
AA seq
DB search
MNNIFTDTRLRSEIRQGLAKIGFTKPTPVQEKVIPAMLKGESVIAQAATGSGKTHAYLIP
ILNAIDEDARYVQAIVTAPSRELADQLYRVARQLRDNSGLNIAIAHLAGGSDRDRQIARF
EQNKPQLVIATPGRLLDFADKKILLLDQVKNFVIDEADMTLDLGFLADVDKIAARLPKDV
VMSAFSATIPVKLTNFLRKYMAKPEEIVIDNPAVIAPTIKNDLLDIGSKDRKKIVYKLLT
MGQPYLALVFANTKQMVDELADYLTKQGLKVAKIHGSITERERKRTLREVRAGQYQYVVA
SDLAARGIDLPGVSLVINYEIPKDLEFIIHRIGRTGRNGLPGHAVTLVREEEMNRVGALE
YMGVHFDFVEIKDGALAPRTHYRRRDNRTAANRQLDPHMKGVVKKIKSKRKPGYKKKIKQ
AIQEDNRKKRKIEARHEMRHQKHLRKRKREQKR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatttttactgatacccgcttaagaagcgaaatccgccagggcctggccaag
atcggctttactaaaccgactccggtgcaggagaaagtcatcccggccatgctgaaaggc
gaaagcgtgatcgcccaggcggctacggggagcgggaagacccacgcctacttgatcccg
attttaaacgccattgatgaagatgcccgctatgtccaggccatcgtcacggctcccagc
cgggaactggctgaccagctctaccgggtggcccgccagctgcgggataattccggctta
aacatcgccattgcccacctggccgggggcagcgaccgggaccggcagatcgccagattt
gaacagaacaagccccagttggttatcgctacgccgggccggcttttggactttgctgac
aagaagatcctgcttttggaccaggtcaagaactttgtcatcgacgaagccgacatgacc
ctggacttgggcttcctggccgatgtggacaagattgccgcccgcctgccaaaggacgtg
gtcatgtccgccttttcagccacgattccggtcaagctgaccaactttttacgcaagtac
atggccaagccggaagaaatcgtgatcgacaatccggcagttattgccccaaccatcaaa
aacgacctcttggacatcggcagcaaggacagaaagaagatcgtctacaagcttttgacc
atgggccagccttacctggccctggttttcgccaacaccaagcagatggttgacgaactg
gctgactacctgactaagcaagggcttaaggtggccaagatccacggcagcattaccgaa
cgggaaagaaagcggaccctgcgggaagtccgggccggccagtaccagtatgtcgtcgcc
agcgacctggctgcccgggggatcgacctgcctggcgtcagcctggtgatcaactatgag
attcccaaggacctggaattcattatccaccggatcggccggactggccggaacggcctg
ccgggccacgccgtgactttggtcagggaagaagagatgaaccgggtgggggccttggag
tacatgggcgttcactttgacttcgttgaaatcaaggacggggcactcgctccgcggact
cactaccgccgccgggacaaccggacggctgcaaaccgccagcttgacccccacatgaag
ggcgtggtcaagaagatcaagtccaagcgcaagcctggctacaagaagaagatcaagcag
gcgattcaagaagacaaccgcaagaagcggaagattgaagcccgccacgaaatgcgccac
caaaagcacctccgtaagcgcaagcgcgagcaaaaacgttga
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