Leucobacter denitrificans: H9L06_01330
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Entry
H9L06_01330 CDS
T06817
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ldn
Leucobacter denitrificans
Pathway
ldn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ldn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L06_01330 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldn03400
]
H9L06_01330 (mutM)
Enzymes [BR:
ldn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H9L06_01330 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H9L06_01330 (mutM)
DNA repair and recombination proteins [BR:
ldn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L06_01330 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QNN63049
UniProt:
A0A7G9S5C4
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All DBs
Position
271353..272303
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AA seq
316 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGARVVAVSVVDPRALKRHMPLGGDDGLGGHGRTLTAEAGLL
RSADFERRLTGAVLAAPERRGKFMWIPIVAPSQQSDVRGAALLAHLGMSGQLLLRANDAP
DDRHVRIRIWIEHPEHCELRVDFADQRLFGSLALDGLVPTLPSGSIPAQAVHIARDPLDP
YFDDAEFVRRLRSRATGVKKLLLDQALVSGVGNIYADETLWRSRIHPETLGTSVSQRGAT
AMLGHMRDVFAQALAEGGTSFDAQYVNVNGQAGYFAHSLHAYGRTGEPCHRCGGPIRRIT
FGGRGSHFCPQCQRRR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaactgcccgaagtcgaggtcgtgcgagccggtcttgcccccgcggtgaccggc
gcacgtgttgtcgccgtttcggtcgtggatccccgtgcgctcaaacgtcacatgccactc
ggaggtgacgacggcctcggtgggcacggccgcactttgaccgctgaggcggggcttctg
cgatccgctgacttcgaacggcgcctgactggcgctgtgctcgcggcacccgaacgccgt
ggcaagtttatgtggatccctattgttgcgccgagccagcaaagtgatgtcaggggagct
gctcttcttgcgcatctcggcatgagtggccaattgctgcttcgtgcgaatgatgcgccg
gatgatcgtcacgttcggattcgcatctggatcgaacacccggagcactgcgagcttcgc
gtcgactttgccgatcagcgactttttgggtcgcttgcgctcgacgggttggtgccgacg
cttccgagtggatcgattcctgcgcaggcggtgcacatcgcgagggatccgctcgacccg
tacttcgacgacgccgagtttgtgcgtcgtctgcgttcgcgtgccaccggcgtgaagaaa
ctgctgctcgatcaggcgctcgtgagtggggtgggaaacatctacgctgacgagacgctg
tggcggtcgaggatccaccccgaaacgctaggaacctcggtctcgcagcgaggagcgacc
gcgatgctcggccacatgcgtgatgtatttgcgcaggcgcttgccgagggcggtacgagc
tttgacgcgcagtacgtcaacgtgaatggccaggcgggttacttcgcgcattcgctccac
gcgtacgggcgcacaggggagccgtgccaccgctgcggcgggccgattcggcgcatcacc
ttcggcggtcgcggttcgcacttctgcccccagtgccagcggcggcggtga
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