Leucobacter denitrificans: H9L06_03300
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Entry
H9L06_03300 CDS
T06817
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ldn
Leucobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
ldn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldn03032
]
H9L06_03300
03400 DNA repair and recombination proteins [BR:
ldn03400
]
H9L06_03300
Enzymes [BR:
ldn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L06_03300
DNA replication proteins [BR:
ldn03032
]
Prokaryotic type
DNA Topoisomerases
H9L06_03300
DNA repair and recombination proteins [BR:
ldn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L06_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNN63364
UniProt:
A0A7G9S689
LinkDB
All DBs
Position
complement(691083..692120)
Genome browser
AA seq
345 aa
AA seq
DB search
MVTKQNPAKRTRNITRENTGDTFEYRLGARRITGRASVERIEALAIPPAWTDVEISRSAT
AKVQAKGVDAAGRTQAIYHPSFVKRQDQRKFARMVRFGRALPKLRARVDRDLRSRSLGRD
RVAGCVIHLIDEQLFRVGNAEYASRHGSFGITTLQRKHLDVSPTIVEFNFVGKSGKEQKR
RVRDPRAARVIAQLLELPGDEVFRFVEAGQSADEDADPNPHPLHSRHVNAYVRRHLGREF
SAKDFRTWGGTVAVVGAIFAVDPAELRTALTTEHGRASVLRDAVRIAAERLGNTEAVTKG
SYVDPRVLDLVSHPRVIERVRRKRFRERLHFSIDEQRTLAVCSRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgaagcagaatccggcgaagcgaacccgcaacattacgcgcgaaaatacgggc
gatacattcgagtaccgcttgggggcgcgccgcatcactgggcgcgcgtcggttgagcga
atcgaggctctcgcgatcccgcccgcctggactgacgttgagatttcccgctccgcaact
gcgaaggtgcaggcaaagggcgtagacgcggcggggcgaacgcaggcgatctaccacccg
tcgtttgttaagcgccaagatcagcgcaagttcgcgcgtatggtgcgatttgggcgcgcg
ctgcccaagttgcgggcgagggtggatcgcgacttgcgcagccggtcgctcggccgtgat
cgggtggccgggtgcgtgatccacctcatcgacgagcagctgtttcgagtgggaaacgct
gagtacgcctcgcgccacgggagttttggcatcacgactcttcaacggaagcatcttgac
gtatcgcccacgatcgtggagttcaactttgtgggcaagagcggcaaagagcagaagcgc
cgcgtgcgagatccgcgagcggcaagggttatcgcgcagctacttgaattgcccggcgat
gaggtgtttcgcttcgttgaagcggggcagagtgcagatgaggacgcagacccgaaccct
cacccgcttcacagccgccacgtcaatgcgtacgtgcgtcggcatctcggccgtgaattt
agcgcgaaagactttcgcacctggggcggcacggtcgccgtggtgggggcgatttttgcg
gtggatcccgcggagctccgaacggcactcaccaccgaacatggccgcgcaagcgtgttg
cgcgacgcggtgcgaatcgcggcagagcggcttgggaacacggaggcagtgacgaagggc
tcatacgttgacccccgggtgctcgatctcgtgagtcacccgagggtcattgaacgtgtg
cgtcgtaagcgctttcgcgaacggctccacttcagtatcgatgagcagcgaacgctcgca
gtgtgttcgcggcgctag
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