Leucobacter denitrificans: H9L06_03825
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Entry
H9L06_03825 CDS
T06817
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ldn
Leucobacter denitrificans
Pathway
ldn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L06_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldn03019
]
H9L06_03825
03009 Ribosome biogenesis [BR:
ldn03009
]
H9L06_03825
Enzymes [BR:
ldn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L06_03825
Messenger RNA biogenesis [BR:
ldn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L06_03825
Ribosome biogenesis [BR:
ldn03009
]
Prokaryotic type
rRNA helicases
H9L06_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNN63458
UniProt:
A0A7G9S6I3
LinkDB
All DBs
Position
complement(802024..804057)
Genome browser
AA seq
677 aa
AA seq
DB search
MPSSENNAPDTDPVDEQRTTFADLGLAPEVLEAITAVGYETPSAIQAATIPTLLQGRDVV
GLAQTGTGKTAAFALPILSRIEPGQGVPQALVLAPTRELALQVCEAFESYASKLPQVHLL
PVYGGQAYGQQLSALRRGVDIVVGTPGRIMDHLKRGSLDLSEIKYLVLDEADEMLKMGFA
EDVETILADTPEEKQVALFSATMPAQIRRISQQYLNDPEEVKIAGKTQTSANITQRYLVV
SYMQKLDALTRILEVETFDGLIVFTRTRGDSEQVAEKLRARGYSAAAINGDIPQNVRERT
VQSLKDGRLDILVATDVAARGLDVERISHVVNYDLPIDTESYVHRIGRTGRAGRTGDAIS
FVTPRERRMLSSIERATKQPLTQMQLPRVDEVNATRLSRFDDAITAALDETDRIEKFRDI
IDHYVRHHDVPENDVAAALAVVSQGSTPLLLDESDDQKFARDRQQAQRFLEDAGSDRGRG
RDDRGDRGERRQRTQRDDLRMYRIEVGHRQKINPGQIIGAIANEGGLTRDDFGRIQIRDD
FSLVELPKSLSREALDALRATRVSGKLIELKEDNGPAPRGRGFEDRGDRGSDRGGRGGYR
GDRGSDRGGYRGDRDNRGDRGGYRGDRNDRGDRGGYGRDDRGDRGGYRGDRDRNDRGDRG
GRDFGNNRADGKRKPRW
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccctcttctgagaataacgcgcccgatacagaccccgtagacgagcagcgcacgact
tttgccgatcttggcctcgcacccgaggtacttgaggcaatcaccgccgtaggttacgaa
accccttcggcgatccaggccgcaactattccgaccctgcttcagggccgcgatgttgtt
ggtcttgcccagaccggaaccggtaagactgccgcgttcgccctccccattctttcccgc
atcgaacccggccagggtgtgcctcaggcgctcgtgctcgcgccaactcgagagctcgcg
ctccaggtctgtgaggcgttcgagagctacgcttcgaagctgccgcaggtgcacctgctg
ccggtgtacggtggccaggcttacggtcagcagctctctgcgctcaggcgcggcgttgac
atcgtcgtgggcacgcctggtcgaattatggatcacctgaagcgtggttcgctcgatctt
tcagagatcaagtacctcgtgctcgatgaggccgacgagatgctgaagatgggcttcgcg
gaagacgtcgagacgatcctcgctgacacaccagaagagaaacaggttgcactgttctcg
gcgacaatgccggcgcagattcgtcgcatctcgcagcagtacctcaacgaccctgaagag
gtgaagatcgccgggaagacgcagacttcggcgaacatcacccagcggtacctcgtggtg
tcgtacatgcagaagctcgatgcgctcacccgcatcctcgaggtcgaaactttcgacggg
ctcattgtgttcacccgcacgcgtggcgattccgagcaggtcgcagagaagctgcgcgcg
cgtggctactcagccgctgcgatcaacggcgacattccgcagaacgtgcgcgagcgcacc
gtgcagtctctgaaagacggccgcctcgatatcctcgtcgcgacagacgtcgctgcgcgc
ggccttgatgttgagcgcatcagccacgtcgtcaactacgatctgccgatcgataccgag
tcatacgtacaccgcatcggccgcaccgggcgtgcgggccgtacaggtgatgcgatcagc
tttgttacgcctcgcgaacgccgcatgctttcgtcgatcgagcgagcgaccaagcagcct
cttacgcagatgcagctgccgcgcgtcgacgaggtgaacgcaacgcgcctatctcgcttt
gacgatgcaatcaccgcagcactcgacgagaccgatcgcatcgagaagttccgcgacatc
attgatcactacgtgcgtcatcacgacgtgcccgagaacgatgttgctgccgcacttgcg
gtggtttcgcagggcagcacaccgctgctccttgacgaatcagacgatcaaaaattcgcg
cgcgaccgccagcaggcgcagcgtttccttgaagacgcgggcagcgaccgtgggcgtggc
cgcgacgaccgtggcgaccgcggagagcgccgccagcgcactcagcgcgacgacttgcgc
atgtaccgcatcgaggtaggacaccgccagaagatcaaccccggtcagatcatcggtgct
atcgcgaacgagggcgggctcacccgtgatgacttcggtcgtatccagattcgcgatgac
ttctcgctcgtcgaactgccgaagagtctttcgcgcgaggcgctcgacgctctgcgtgcg
actcgtgtgagcggcaagctcatcgagctcaaagaagacaatggcccagctccgcgtggt
cggggatttgaagaccgcggtgaccgcggatcagatcgcggtggccgtggcggttaccgt
ggcgaccgtggatcggatcgcggcggataccggggtgaccgggacaatcgcggtgatcgc
ggtggataccgaggcgatcgaaacgaccgcggtgatcgaggtggctacggccgtgacgac
cgcggagaccgcggtggatatcgcggcgatcgtgaccgcaacgatcggggcgatcgcggt
ggccgtgacttcggcaacaaccgtgccgacggaaagcgcaagcctcgctggtaa
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