Leucobacter denitrificans: H9L06_05060
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Entry
H9L06_05060 CDS
T06817
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ldn
Leucobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
ldn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldn03032
]
H9L06_05060 (topA)
03400 DNA repair and recombination proteins [BR:
ldn03400
]
H9L06_05060 (topA)
Enzymes [BR:
ldn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L06_05060 (topA)
DNA replication proteins [BR:
ldn03032
]
Prokaryotic type
DNA Topoisomerases
H9L06_05060 (topA)
DNA repair and recombination proteins [BR:
ldn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L06_05060 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QNN63668
UniProt:
A0A7G9S743
LinkDB
All DBs
Position
complement(1046031..1048802)
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AA seq
923 aa
AA seq
DB search
MAKKLVIVESPTKARTIGGYLGDDYEVIASVGHIRDLAEPSELPSDLKKGPLGKFAVDID
NGFTPYYVVNDNKKKTVTELKRALKGADELWLATDEDREGEAIAWHLLEVLKPKVPVRRM
VFHEITQEAIEEAKANTRDLDTSLVDAQETRRILDRLYGYDISPVLWRKVAPKLSAGRVQ
SAATRLVVDRERERQAFVAAEYWSIGARFVPADDATDRVPFEAKLVRLDGKRIASGGDFG
DTGELTEKAQKAQVIGLDAARATALATALESGPDATVRSLETKPHTRRPAAPFTTSTLQQ
EASRKLRYSSRQTMSFAQSLYENGHITYMRTDSPTLSQQAIQAARSQASALYGAETIPEK
PRVYTGKSKGAQEAHEAIRPAGDVFQRPSELKGKLTQGEFALYDLIWKRTIASQMADAKG
STDTVTLAVPIAENSATLDAEFTASGTVITFPGFLLAYEEGKDEKRGDQEQNVSLPKLTE
QQRLGIENPEAKGHETSPPPRYTEASLTKRLEELGIGRPSTYAATISTIMDRGYVSKQGQ
ALIPSWIAFSVVRLLEEHFSALVNYDFTAEMENDLDEIAAGKTDRSEWLKEFYFGTDVHP
GLRGVVDNLGEIDARAINTIRIDDQISLRNGKYGPYLEVFDEKSEVDENGEMKPRAVNIP
DGMAPDELTPQRAHELAAAEPAEDRVVGLHPETGKRIIAKNGRFGPYVQELPNEDEELPK
GEKPRTASLFKTMDPATIDLDTAVALISLPRVVGTDEAGEPITAQNGRYGPYLKKGTETR
TLPSEDAIFSIDLAGALEILAQPKYGARRASSALKEFEADPVSGKPIKVRDGRFGPYVTD
GETNATIPRGDSVEDITFERAVELLAIKRAKGPAKKKAPAKKKAAAKKTTAKKAVDPARS
AAAKKAAETRKANAAKKAAEAAE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagaagctcgtcatcgtggagtcaccaactaaggcgcgcacgatcggtggatac
cttggcgacgactatgaggtcattgcctcagtcggtcatattcgcgatcttgctgagccc
tcagaacttccgagcgacttaaagaagggtccgctcggcaagttcgcggttgacatcgat
aacggctttacgccctattacgtcgtcaacgacaacaaaaagaaaacggtcaccgagctc
aagcgagctctcaagggagcggacgagctgtggctcgcaactgatgaggaccgcgagggc
gaggccatcgcgtggcacctgcttgaagttctgaagccaaaggttccggtgcgccgcatg
gtgtttcatgagatcacgcaggaagcgatcgaggaagccaaggcgaacacccgagacctt
gatacgtcactggttgatgctcaagagactaggcgaattctcgatcggctctacggctac
gacatttcgccggtgctctggcgcaaggttgctccgaagctttcggccggtcgcgtgcag
tctgccgcgactaggttggttgtcgaccgtgagcgcgaacgccaagccttcgtggctgcc
gagtattggagcatcggggcacggtttgtgccagcagatgacgctactgatcgtgtgccg
ttcgaggccaagcttgttcggcttgatggcaagcgcatcgcttcaggtggcgacttcggc
gacactggtgagcttaccgagaaggcgcagaaggctcaggtcattgggcttgacgcagcc
agggctacggctctcgcaaccgcgttagaaagtggcccagacgcgaccgtgcgctcactc
gagaccaagccgcacacccgtcgtcccgctgcgccattcaccacgtcaacactgcagcag
gaggcgtcgcgaaagcttcgctatagctcccgccagaccatgtcgtttgcgcagtcgctt
tacgaaaacggacacattacttatatgcgtaccgattcgccgacgctttcgcagcaggcg
attcaggctgcgcgttctcaggcatctgcgctctacggtgctgaaaccatcccagagaag
ccgcgcgtctacacaggcaagtcgaagggtgctcaggaagcccacgaggcgattcgcccc
gcaggagatgtcttccagcgcccgagcgagctcaaaggcaaactcactcagggtgagttc
gcactctatgacctgatctggaagcgcacgatcgcaagccagatggctgatgcaaaggga
tccactgacacggtcaccctcgcagtgccgattgctgagaactcggcaaccctcgacgct
gagttcactgcgagcggtaccgtcatcacgttcccgggcttcctcctcgcctatgaagaa
ggcaaagacgagaagcgcggcgatcaggagcagaacgtttcgctgccgaaactcaccgag
cagcagcggcttggcatcgaaaacccagaggctaagggacacgagacgagcccgccgcca
cgctacaccgaggcaagcttgacgaagcggctcgaggaactcggtatcggcaggccatcg
acctatgcggcgacaatctcaacgatcatggatcgcgggtacgtctccaagcagggtcag
gctctgatcccgagctggatcgcgttctccgtcgtgcgcctgctcgaagaacacttctcg
gcactcgtgaactatgacttcactgccgagatggagaacgacctcgatgagatcgcggct
ggcaagaccgaccgctctgaatggctcaaagagttctacttcggtaccgatgtgcacccg
gggcttcgtggtgttgtcgacaacctcggcgagatcgacgcacgagcgatcaacacgatc
cgcatcgatgaccagatttcgctgcgcaacggcaagtatggcccgtacctcgaggtcttc
gatgagaagagcgaggtcgacgagaacggcgagatgaagccgcgcgccgtgaatattcca
gacggcatggctcccgacgagctcacaccgcagcgcgcgcacgaacttgccgcagccgag
cccgcagaagaccgggtggttggcctgcacccagagactggcaaacgcatcattgcgaag
aacggtcgcttcgggccgtacgtgcaggagcttccgaacgaagacgaggagctgcctaag
ggcgagaagccgcgcaccgcgtcgctgttcaagacgatggatccggcaacgatcgatctc
gacaccgctgtggcgctcatttcgctcccgcgcgtcgtcggtaccgatgaagcgggcgag
ccgatcaccgcacaaaacggtcgatacggcccgtacctcaagaagggcaccgagaccaga
accctgccgagcgaagacgcgatcttctcgatcgatcttgcgggcgccctcgaaatactt
gcccagcccaagtatggtgcacgacgggcgagctcagcgctcaaagaattcgaagcggat
ccggtcagtggcaagcccatcaaggtgcgcgacgggcgatttggcccatacgtgaccgac
ggcgaaacaaacgcgacgatcccgcgcggcgactcggtcgaagacatcaccttcgaacgg
gccgtagagctgctcgccatcaagcgggccaagggtccggcaaagaagaaggcgccagcg
aaaaagaaggctgcggcgaagaagacaaccgcgaagaaggcagtcgatccggcgcggtca
gccgcggcaaagaaggctgccgaaacccgcaaggcaaacgctgcgaaaaaggcggcagag
gcggccgagtaa
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