KEGG T02289: LDBPK

Leishmania donovani: LDBPK_030180

Entry

LDBPK_030180      CDS       T02289

Name

(RefSeq) U2 splicing auxiliary factor, putative

K12836

splicing factor U2AF 35 kDa subunit

Organism

ldo Leishmania donovani

Pathway

ldo03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:ldo00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LDBPK_030180
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ldo03041]
    LDBPK_030180
Spliceosome [BR:ldo03041]
Complex A
  U2 snRNP components
   U2 related factors
    LDBPK_030180
Complex B
    LDBPK_030180

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 RRM_1 Torus zf-CCCH_10 Herpes_UL87 zf-CCCH_4

Other DBs

NCBI-GeneID:

13390358

NCBI-ProteinID:

XP_003857984

UniProt:

A0A3S5H527

LinkDB

Position

3:45834..46466

AA seq 210 aa
MTAHVDRCVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAVEHIKDREWNFEL
DRKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKEL
RGKKLNDIIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLEKEQT
KYWKKKEKRHEHSSSDRKRSRSRSPADTRW

NT seq 633 nt +upstreamnt +downstreamnt
atgacagcgcacgtggatcgctgcgtcttcttctccaagatgggcgcgtgccggcacggc
gatcagtgcacgaagttgcactaccgccccgacacatcgccgacggtgctgttccctctg
atgtacccaaacccgcacgccgttgagcacatcaaggaccgcgagtggaacttcgagctg
gacaggaagtatttgaagaagcattttgagcacttctacaaggaggtgtggcgcaccttc
atggagttcggccgtattgcggagctgcgcgtcgtgagcaacctcggcgatcacctcctg
ggcaacgtgtacatccgcttcgaggacccgcaggtcgccacgcgcatcgtaaaggagctg
cgcggcaagaaactgaatgacatcattgtgctgcctgagctgtcgcctgtcacgaacttc
gccgaggcgtgctgcaaggaggatctcgagaaccgttgccagcgcggcgagcagtgcaac
tacctccacatcatgaaggtgtcgcgccgcctcctcgagaagcttgaaaaggagcagacc
aagtactggaaaaagaaggagaagcgtcacgagcatagcagcagcgaccgaaagcgtagc
cgctctcggtcgcctgctgacacgcgctggtag

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