Leishmania donovani: LDBPK_050140
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Entry
LDBPK_050140 CDS
T02289
Name
(RefSeq) nucleolar RNA helicase II, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_050140
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_050140
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_050140
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
Pre-60S particles
Helicases
LDBPK_050140
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LDBPK_050140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ERCC3_RAD25_C
ResIII
Hera_DD
Motif
Other DBs
NCBI-GeneID:
13391042
NCBI-ProteinID:
XP_003858201
UniProt:
E9B8A4
LinkDB
All DBs
Position
5:40959..42995
Genome browser
AA seq
678 aa
AA seq
DB search
MPRRAREESEEEKPHRITKLAGSSDDDVPVKASKISAKASDHGNGVAAEKRKRTEGSCKV
AVTSATAPAEEKDEEVPNNGCAATARPFSEFEMNPIVVKALQSRGIESMFPVQALTFNAI
MRNTDVLVQARTGSGKTLAFGIPIVERLLKLPSHFTRGRGPAAVIFCPTRELAIQVQDVL
CGISCGLVVTALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDE
ADHMLDIGFKDDIELLLSQVAEQNGSVGAERPVHQTLLFSATVPEWVHTCSFIAKDKEFI
DMVGKEAVRTASTIKFYRRKCNFSEISSMLADLIKVYSGAHGRTLVFTNTKKDCHDLSIN
NTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLPMVDLVIQCAPPSDI
DAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLPAPTREEILKAVARD
AAEDLARVERRATDLFMDQAAELLKDADPVEILASALAVMSGYTSNITTRGLITGTPGYV
TVQMTSDRPLPVPVYCSILRNNLGDETFMRCRDITLLQDDPGCVFDVLEQFAERVMSTPM
RGITFQRIETLPPIIARELNSSRGGRSGFNYGGGRGGFNNGGGYGSGRGGFGGYGGGRGG
GRGGGRGGGRGGGFQRRY
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgcgcgcgcgaggagagtgaggaggagaaaccgcaccgcatcacgaagctc
gccggcagcagcgacgacgatgtgccggtgaaggcgtcgaagatctccgccaaggcgtcg
gaccacggcaacggcgttgctgcagagaaacggaagcgcacggaggggagctgcaaggtt
gctgtcacttcggcgacggcaccggcggaggagaaggacgaggaggtgccgaacaacggc
tgcgccgccacagcgcgcccgttctcggagttcgagatgaaccccatcgtcgtcaaggcg
ctgcagtcacgcggcatcgagtctatgtttcctgtgcaggctctcacctttaacgccatc
atgaggaacacggacgtcctcgtgcaggcccgcaccggcagcggcaagacactcgcgttc
ggtatcccgatcgtggagcggctgctgaagctgccgagccacttcacccgcggccgcggc
ccggctgccgtgatcttctgccctactcgtgagctggccatccaggtgcaggatgtgctc
tgcgggatcagctgcgggctcgtcgtgacggccctgtacggcggtgttgcctacgcgaat
caggagcgcgtgctgcgcagcggcgtcgacattgtggtggccacccccggccgcgcgaag
gactttctagagaagggcacgctgcattttgaccgcgttgtgatggcgtgcctggacgag
gcggaccacatgctggacatcggcttcaaggacgacattgagttgctgctctcgcaggtg
gccgagcagaacggctctgtcggcgctgaaaggccagttcatcagacgctgctgttctcc
gcgacggtgccggagtgggtgcacacgtgctccttcatcgccaaggacaaggagttcatc
gacatggtcggcaaggaggctgtgcggacagcgagcacgatcaagttctatcgcagaaaa
tgcaacttcagcgagatctcctctatgctcgctgatctcatcaaggtgtacagcggtgcc
cacggccgcactctcgtcttcaccaacacaaagaaggactgccacgacttgtccatcaac
aacaccaaactggactcgcagtgcctgcacggtgatatgcagcaggagcagcgcgagagt
accatgaagagcttccgcgacaacaagttcagcgtcctcatcgccaccgacgtggcggcc
cgcggtctcgacctgcccatggtggacctggttattcagtgcgctccaccgagcgacatc
gacgctttcattcaccgcgccggccgtacgggacgcgctggccgcaagggtgtgtgcgtg
ctgctctaccaaccgcgcgaggagtacgttgtcgagcgcatcgagcgccacgcgaaaatg
aagtttgacgtcctgccggcacccacgcgtgaagagattctcaaggccgtcgcccgtgat
gccgctgaggacctggcgcgcgtcgagcgccgtgcaaccgacctcttcatggatcaggca
gccgagctgctgaaggacgcagacccagtcgaaatcctggcctcggcgctcgccgtcatg
agcggctacacgtcgaacatcaccacgcgcggtctcattactggcacgccagggtatgtg
acggtgcagatgacgtcggatcgaccgctgcccgttccggtgtactgcagcatcctccga
aacaacctcggcgatgaaacgttcatgcggtgccgcgacattacactgttgcaggacgac
ccgggctgcgtcttcgatgtgctggagcagtttgccgagcgtgtcatgagcacaccgatg
cgcggtatcaccttccagcggatcgagacccttcctccgatcatcgcgcgcgagctcaac
agcagccgcggcggtcgcagtggctttaactacggaggcggtcgcggtggcttcaataac
ggcggcggctacggcagtgggcgtggtggcttcggcggctacggggggggtcgcggcggc
ggtcgcggcggcggccgcggcggtgggcgtggtggcggtttccagcgccgctactga
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