Leishmania donovani: LDBPK_070130
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Entry
LDBPK_070130 CDS
T02289
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Pathway
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_070130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldo03041
]
LDBPK_070130
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_070130
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_070130
Spliceosome [BR:
ldo03041
]
Complex A
U1 snRNP components
U1 related factors
LDBPK_070130
Complex B
LDBPK_070130
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
Pre-60S particles
Helicases
LDBPK_070130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
CMS1
GOLGA2L5
Motif
Other DBs
NCBI-GeneID:
13391851
NCBI-ProteinID:
XP_003858455
UniProt:
E9B909
LinkDB
All DBs
Position
7:56968..58602
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AA seq
544 aa
AA seq
DB search
MSDYGDAQHNGGDSGGRGEGGYGGPRDGGYGGPRDGGYGGGYGGGRGGDRYRSGGYGGGR
GYGGGYGGGRGGDRYHDRHGGLGSNLHRIDWDAVQKVATQWNFYKPQKPRSEEEIATWLR
ENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVA
KTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIM
TTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMG
FEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHV
FVVEGYHKEEKMEEILRQVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLAIHGDKLQSS
RDYVLDRFRKDERAILVATDVAARGLDIKDLDVVVNYDMPLNIEDYVHRIGMLTDFRPLT
VSLAPIPSVYLSLCVCVCRFLFCCVSLCYPCCRTTPATASAADIATFFPSTSLASSSACQ
IRLC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggcgacgctcagcacaacggcggcgacagcggtggccgcggcgagggt
ggctacggcggtccccgtgacggtggctacggcggtccccgtgatggtggctacggtggc
ggctatggaggcggtcgtggcggggatcgctaccgcagcggcggctacggtggtggccgt
ggctacggtggcggctacggcggcggccgcggtggagatcgctaccatgaccgccacggc
ggcttgggctccaacctgcaccggatcgactgggacgccgtgcagaaggtggcgacgcaa
tggaacttctacaaaccgcagaagccgcgcagcgaggaggagattgcgacgtggctgcgc
gagaacagcatcaccatctacggtgaccgcgtgccgcagccgatgctcgaattttccgac
ctggttgccccagatgccattcatcaggctttcatggacgccggattccagaagccgacc
ccgattcagtccgtctcctggccggtcctgttgaactcgcgtgacatcgtcggcgtggcc
aagacaggctctggcaagacgatggccttcatgattcccgcggccctgcacattatggcg
cagcctccgctgcagcctggcgacggtcccatcgccctcgtcctcgccccgacccgcgaa
ctggcggtgcagatcgagacagagacacgcaaggctttgacgcgcgtgccgagcattatg
acgacgtgcgtgtatggcggcaccccgaaggggccgcagcagcgcgccctgcgcgccggt
gtgcacgtctgcattgcaacgccaggtcgcctgattgacctgctggagacgaactgcacg
aatctgctgcgtgtcacctacctcaccctcgacgaggcggatcgcatgcttgatatgggt
ttcgaagaccaaatccgcaagatctgctctcagattcgcacagaccgccagacgctcatg
ttctcggcgacgtggccgcgcgagatccgaaacctcgccgccagcttccagaaggacttt
gtccgtgtacacatcggctccgaggagcttgtggccaacgctgatgtccaccagcacgtc
ttcgtcgttgagggatatcacaaggaggagaagatggaggagattcttcgccaggtcgga
ccgcagcgcgtactcgtctttgtgaagacaaagaagtcgtgcgacattttgcaggaccgc
cttggccgcgcgctgcggcagacggtgctcgccattcacggtgacaagctgcagtccagc
cgcgactacgtactggaccgcttccgcaaagacgagcgcgcgatcctcgtcgccaccgac
gtggcggcgcgcggtctcgatatcaaggacttggacgtggtggtgaattacgatatgcca
ctgaacatcgaagattatgtgcatcgtattggtatgttgacggacttccgccctctcacg
gtatcgctagccccgatcccctctgtgtatctgtctctgtgtgtgtgtgtgtgccgcttt
ctcttctgttgtgtctcattgtgctacccgtgctgtcgcaccacgcctgcaactgcctct
gccgcggacatcgccaccttctttccttccacctcgctcgcgtcttcttcagcttgccaa
atccgcttatgctaa
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