Leishmania donovani: LDBPK_120910
Help
Entry
LDBPK_120910 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ldo
Leishmania donovani
Pathway
ldo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LDBPK_120910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldo04131
]
LDBPK_120910
Membrane trafficking [BR:
ldo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LDBPK_120910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Vps39_1
Clathrin
CNH
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
13390439
NCBI-ProteinID:
XP_003859210
UniProt:
E9BB73
LinkDB
All DBs
Position
12:555245..558160
Genome browser
AA seq
971 aa
AA seq
DB search
MQAEEAGHASLRIEAYRVVSLGGPIPHKIESITTYRTLVFVGTSDSKLLAYRVGACDGSA
ASLTLLQEITDSRRHAVRQLTVIGGRRLLVLVGDVITVYHIHDDAASSGRGFQLRDVTTI
TGLKDTVAFHVKQHRGVVSMAVLQRKRVTFFEASHTNLDFLLSATVVLPDGVKTLSWMGR
SIVLGGRKEYLLCNPSTASTAALYPTPRSGAAPLVLPMTPVPEVLVASDGAGLRALLYDG
SEVPGDSRVLWATPPAEMRYEHPYVVSYHPSAPHQALQVRLPLLTTLEDATTYPRSCLYQ
TIDLPKVVKVAQCHWIDYDSAMPSKTAPPDVLSHSPIVVADADHRLYFLARNSVTGQAEA
LAAAKLFAAADLLCRLCPHEVAPMTLRQIVISGALHKFIRHQDYVGCFHDLSSVESDPRV
AIQLFPGFLRPDEATPSCPALPLAAPAAVVAAALPALVEYLQSQRAALVLLSGCEPAESV
QSQLKAVDRALVMSFCATEREEALLELLRGENACDAADVAAILRERRQWVALTLLLEAHG
QYEEAASQLRDLASTRDAETEALQAQSGALKELFQRHPFSAARLDAYAPQCTIREWLTSR
SSAHLLSAADSTAMCTVATAMMTALSFFRRRPLAQFYSLFEKHSSWVLGTVPADIAVRIF
FSEANAPHYTAALQVLQTYTENPSTTPRLMLVVEYLFQLFADARAHVTEPAVYERYWRGL
GELLFASPVKTVTSVEERQRLRDRLREFLLNSPHVNLEFAEAYFDAADIRSACLPERAAV
HRRKGSHRAAIRMFLNESERLDDATAYARSVYADGSSDAYTALLEALLRPAAGTPRVTEA
LEVMNTCDGVDAAAVLPMLPDEMPFAQVSSFLLHALRANTTAYRASAVYSAILKARTLQG
QESRVHLSSRAVVLEEGMVCPVCQRRLRPDTVLAVYPDNVVLHHGCACDEHVCSATLRDY
RHDAYAALEDL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagaggaagccggccacgcgtcgctgcggatagaagcgtatcgggttgtttct
ctggggggccccatcccacacaagatcgagtccatcacgacataccgcacgctcgtgttt
gtgggtaccagtgacagcaagttgcttgcgtaccgcgtcggagcttgtgacggcagcgcc
gcatcgctgaccctactgcaggaaatcacggatagccggcgccatgccgtgcgacagcta
accgtcatcggtgggcgtcgcctactagtgctcgtcggcgacgtcattactgtctaccac
atccacgacgatgccgcttcctctgggagagggtttcagctgcgagacgtcacaacgatc
acagggctgaaggacaccgtcgcgtttcacgtgaagcagcaccggggtgtcgtctccatg
gcggtgcttcagcgcaagcgtgtcaccttcttcgaggcgtcgcacacaaatctcgatttt
ctgctaagtgccacagtcgtgctgcccgacggggtcaaaactctgagctggatggggcgc
agcatcgtacttggtgggcgcaaggagtacttgctctgcaacccctccactgcctccaca
gcggccctctatccaacaccgcgatctggcgcggcgccgcttgtgctgcccatgacaccg
gtgccggaggtcctcgtcgccagcgacggagcgggcttgcgtgcactcctctacgacggc
agcgaggtgcccggcgactcgcgcgtgctgtgggcaacgccaccggcggagatgcgctac
gaacacccgtacgtcgtttcttaccatccgtcagcgccgcaccaggccttgcaggtccgt
cttcctctgctcaccacgttggaggacgccactacctacccgcggagctgcctgtaccag
accattgacctcccaaaggtggtgaaggtggcgcagtgccactggatcgactacgactcc
gccatgccctccaagaccgcgcctcccgatgtgctttctcactcccctatcgtcgtggcc
gacgctgaccatcgcctctactttctcgcgcgaaattcagtgacaggccaggcggaggcc
ctcgccgccgcaaagctgtttgccgccgccgatctactgtgccgcctctgcccgcacgaa
gtggcgccgatgacgctgcgacaaattgtgatctccggggcactgcacaagttcatccgc
caccaggactacgtcggctgcttccacgacctcagctccgtcgagtccgacccccgcgtg
gcaatccagctctttccagggttcctgcgccctgacgaagctacaccgagttgccccgca
ctccctctcgcggcacctgccgccgtcgtggcggctgcgctcccagcgttggtggagtac
ctgcagtcgcagcgggccgcgttggtgctcttgagcggctgtgagcccgctgagtcggtg
caatcgcagctcaaagctgtggacagggcacttgtgatgtctttttgtgccacggaaagg
gaggaagcactgctggaactactgcgtggcgagaatgcctgcgacgcagcagacgtagca
gctatccttcgcgagcgccggcagtgggtggccctcacgttgttgctggaggcacacggc
caatacgaggaggcagcatcgcagctgcgcgacctcgcgagcacgcgcgatgcggagacc
gaggcactgcaggcacagagcggagcgcttaaagagttgtttcagcgacacccgttctct
gcagcgaggctggacgcctacgctccacaatgcactatacgggaatggctcacgtctcgc
tcatctgcgcatctcctctcggccgccgacagcacggcgatgtgcacggtcgcgacggca
atgatgaccgcgctgagcttttttcggcgtcggccgctggctcaattttattcgctgttt
gagaaacactcgtcctgggtgcttggcacggtgccggctgacattgcggtgcgcatcttt
ttctccgaagcaaatgcacctcactacactgcggcgctgcaggtgctccaaacctacact
gagaaccccagcaccacgccgcggctgatgctggtggtcgagtaccttttccaacttttc
gcagatgcgcgcgcgcatgtgacggagcctgccgtgtatgagcgttattggcgggggctc
ggtgagctactcttcgcctctccagtgaaaaccgtcacgagcgtggaagaacgtcagcgc
ctgcgcgaccgcctccgcgagttcctgctcaattcaccgcacgtgaacctagagttcgcg
gaggcctacttcgatgcggcagacatacggtccgcatgtctgcccgagcgggctgccgtg
caccgacgcaagggtagccaccgcgcggccattaggatgtttctgaacgagtctgaacgc
ctggatgacgcgaccgcctacgctagaagcgtctatgctgacggcagcagcgatgcctac
acagcacttctcgaggcgctgctgagaccggctgcggggactccgcgggtgacggaggcg
ctcgaggtcatgaacacgtgtgacggcgtagacgctgccgccgtgctgccaatgctgcca
gatgaaatgccgtttgcgcaggtgagcagttttctgctgcacgcgctacgcgccaacacg
acggcgtaccgcgcttcagccgtgtacagtgctatcttgaaagcgaggacactacagggc
caggagagccgcgttcacctttcctcacgtgcagtcgtgctcgaggaagggatggtgtgc
ccggtgtgccagcgcaggttgcgtccggatacggtgctcgcggtgtatcccgacaatgtc
gtactgcatcatggatgcgcatgcgacgagcacgtgtgctcagcaactctacgcgactac
cgtcacgatgcgtatgcagctctcgaggatttgtag
DBGET
integrated database retrieval system
