Leishmania donovani: LDBPK_140010
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Entry
LDBPK_140010 CDS
T02289
Name
(RefSeq) exosome complex exonuclease, putative
KO
K03679
exosome complex component RRP4
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_140010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_140010
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LDBPK_140010
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
LDBPK_140010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
13392893
NCBI-ProteinID:
XP_003859373
UniProt:
A0A3Q8IBV3
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All DBs
Position
14:2746..3669
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AA seq
307 aa
AA seq
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MSSSVVIVGDSICGGDADQKLSTSSEEVYLRGFNTFAGNNPSDVALLHEGAGEIVAAISG
HIEVTERVISVKGLVPRYQPEIGDVVVGRILEVSGNKWQVDVNSTQTAIMLLSSVTEPGG
ILRRRGRGDELGMRQIFDQDDLVAAEVQRISPDGVMSLHTRAAEKYGLLSGPGILVTVRP
SLVKRAKHQFAELANYRTQLIIGMNGNIWICSLQPSASDAEETEHATDARQNVARVANCI
KALGAAQVQIHPASIEASVAASLEAGLSVFDVSLSKHRDALVARVADMVGLQHRRPAGGG
ASARTLV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccagcgttgtgattgtgggtgactccatctgtggaggcgatgcggatcagaag
ctgagcacgagctccgaagaagtgtatcttcgtggatttaacacctttgcggggaataat
cccagtgacgtggctctgctccacgaaggagctggcgaaatcgtggctgctatcagtggg
cacatagaggtgaccgaacgcgtgatttcggtgaagggtctggtgccgcggtaccaaccg
gaaatcggggatgttgtagtcgggcgcatcttggaagtttcaggaaacaagtggcaagtt
gatgtgaactcaactcaaaccgcgattatgctgctttcaagcgtaacggagcctggaggc
atactgcggcgtcgaggccgcggtgacgagctcgggatgcgccagatcttcgaccaagat
gatctggttgcggcagaggttcaacgcatctctcccgatggtgtgatgtcactgcacaca
cgcgcagcggagaaatatggtctgctgtcgggaccgggtattttggtgactgttcgtccc
tctttggtgaaacgcgcaaagcaccagtttgcagaacttgcgaactaccgcacgcagctg
atcatcggcatgaatggtaacatatggatttgctcattgcaaccctctgctagcgacgcg
gaggagacggagcacgccactgacgcacgtcaaaacgtggcgcgtgttgcaaactgcatc
aaagcactaggagcggcgcaagtccagattcacccagcatcgatagaggccagtgttgcg
gcgtcattagaggcaggtttgtcggtgtttgatgtttcgctttcaaagcacagagatgca
cttgtggcacgcgttgctgatatggtgggattgcaacaccgtcgccctgctggcggcggt
gcttccgcgcgaacgcttgtgtag
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