Leishmania donovani: LDBPK_140900
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Entry
LDBPK_140900 CDS
T02289
Name
(RefSeq) SNF2 family helicase-like protein, putative
KO
K10841
DNA excision repair protein ERCC-6
Organism
ldo
Leishmania donovani
Pathway
ldo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LDBPK_140900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_140900
03400 DNA repair and recombination proteins [BR:
ldo03400
]
LDBPK_140900
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LDBPK_140900
DNA repair and recombination proteins [BR:
ldo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
LDBPK_140900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
13391427
NCBI-ProteinID:
XP_003859458
UniProt:
E9BBX3
LinkDB
All DBs
Position
14:complement(350639..354427)
Genome browser
AA seq
1262 aa
AA seq
DB search
MADDLASLQQQFGAFQDEEEMRMDVAARVVAQSSREALEDEERLKKSWRELEKAEHAVGE
LQLELSEAQLAVAQESSGLLGDAQRNKSSGPATPSPRRVSDIRFQLNAAERELKRADAAV
RKLQKEVDQRQAARLAEAKRHEREEAEAERAAAAARAAAHPKAADVTTVVRAKSATGRPV
PLASSSSTILPRANTSVNGGALAGGSLSASSPTVMTTTRVLYRAPTHLKGITQSDYSGGE
VLPSLSRVQVTRADIRSKQRRYQDDSEMEHYAERVTKRQRLEAVANEQRRLIALGNDGDT
PSQSLSASIEKLAEARVKREGEQDGHAHQVKQESGGDDAAGAATPPVAAVAKARVAKKEA
EGGERARRLPRAGVKVETGEEEGAHDVIDVDALMEADDDAAVAAAVSRVSTQLTGGYTQR
SGKATPSISLSSQQQQQQRGRAGSASSATVSESEEVVWEMEEVTLLPGVRMDAAIYNRLL
DYQQEGLLWLLTLHSRRTGGILGDEMGLGKTIQVAVMINALHHSGMLRGPVLIVAPMTVL
RQWLAELHRWAPYVRSCVMHESSGSDTTRDSLLQSVQGTPAVVITTYAAMRVHCGLLHRT
GFQYVILDEGHKISNPEAGATLAAKSFTTPHRLILSGSPIQNSLKELWCLFDFVRPGLLG
TMSRFIDEFETPIALSRNARASPLSLATAVECAKALQTHIAPYLLRRLKRQVNTSLPPKY
ERVLRVPLTDKQLDQYLQVLSSPVVQGLFAQTAMYGSRNGGLDRDGRDSTGSLHVAGPRA
KMASRRHNSGVRLESFRVMNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISA
ARPGQHRSFRSNNPVDLLGSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQ
AYRYIRMDGATNSHYRQELMDRFNEDVSIFVALLTTRVGGIGVNLIGADRVVIFDPDWNP
ITDVQARERAWRIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQRFFDV
QDGFMESLLLGSEYANRVPVDKRYLLAAHHLHSVSAGDRDRAPGRDRHAALGGEYGNAVP
GVDDDDNTDSDVSEGNIGVAGSKGEQPRKERDFGMLVPLKDEGGIDDVGADPDDTGGADE
DGSPVGIPGMGDRNKKTSKGKEVWRETQMLQKLVDCQDVSVAGHDRVAHRLARKKAEDMI
RRVSSSALTTEAMREQQRQYSLLQAIGEKKAKEAADREEKARYYREEIAAAAAAAARKRR
HE
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatttggcgtcactgcagcaacagttcggcgcctttcaagatgaggaagag
atgcgcatggacgtggcggcgcgcgtcgtcgctcagtcctcgcgagaagcgctcgaggac
gaggagcggctcaagaagagctggcgcgagctggaaaaggcggagcacgctgtgggggag
ctgcaactagagttgagcgaggcgcagctggcggttgcacaggaatcgtccgggttgctg
ggtgatgcgcagcgcaacaagtcatccggtccggcgacgccgtcaccgcggcgggtttcc
gacatccgcttccagctcaacgcagcggagcgcgagctcaagcgcgctgacgcggcggtg
cggaaacttcaaaaagaggtcgaccaacgccaagctgcgcggcttgccgaagcgaaacgg
cacgagcgggaggaagcagaggcagagcgcgcggcagccgcggcccgagccgcagcgcat
ccgaaggcagccgacgtcacaacagtcgtgcgggcaaaaagcgccaccggccgacctgtg
cctctcgcgtcatcgtcctcaactatactcccacgcgcaaacacgagcgtgaacgggggt
gcgctggcgggtggaagcctttcagcgtcatcgccaactgtcatgaccacgacgcgcgtg
ctgtatcgagcgccgactcacctgaagggtatcacgcagagcgactacagcggtggtgaa
gtgctgccctcgctgagccgggtgcaagtgacgcgcgcggacatccgctcgaagcagcgc
cgctaccaggacgactcagagatggagcactacgctgagcgcgtcaccaaacgacagcga
ctggaggcggtggcaaatgagcagcgtcggctgattgccctgggcaacgacggtgacacg
ccttcgcagtcgttgtcggcctcgatcgaaaagctggccgaggcgcgagtcaagagggaa
ggtgagcaagacggccatgcgcatcaggtgaagcaagagtctggtggtgatgacgctgcc
ggcgcagccacgccaccagtcgcagctgtagccaaggctcgagtcgcgaagaaagaggcg
gagggcggcgagcgtgcccgtcgcctcccgagggcaggggtgaaggtggagacaggggaa
gaggaaggggcacacgacgtgattgacgtggacgcactcatggaggccgacgacgacgcg
gcagtggcggcggcggtgagccgggtctccacccagctcactggcggctacactcaacgt
agcgggaaggccacgccgtctatatcgctgagctcgcagcagcaacagcagcagcggggg
cgcgccggctcagcatcgtcagcgaccgtctcggagagcgaggaagttgtatgggagatg
gaggaggtgacgctgctgcccggtgtgcgcatggatgccgccatctacaaccgcctactc
gattaccagcaagagggactactgtggctcctcaccctgcactcccgccgcacgggcggt
atcctcggcgatgagatgggcctcggcaagacgatccaggtggcagtgatgatcaatgcc
ctgcaccactccggcatgctgcgcgggccggtgctgattgtggcaccgatgacggtgctt
cgtcagtggttggcggagctgcaccgctgggccccctacgtgcgctcctgcgtcatgcat
gagagcagcggcagcgacacgacgcgtgactcgctgctgcagtcagttcaaggcacgcca
gccgtggtcatcacaacgtacgcggcgatgcgagtgcactgcggtttgctgcatcgcacg
ggcttccagtacgtcatcctcgacgaggggcacaagattagcaacccagaggctggcgcg
acgctcgcagcgaagtctttcacgacgccgcaccgactgatcttgagtggcagccccatc
caaaactcgctgaaggagctgtggtgtttgtttgattttgtacgccctggccttctcggc
acgatgagtcgcttcatcgacgaattcgagacgccgatcgcgctgagccgcaacgcgcgt
gcgagcccgctgtcgctggcaacagccgttgagtgtgcaaaagcactgcagacccacatc
gccccgtacctgcttcgccggctgaagcgccaggtgaacacgtctttgccgccaaagtac
gagcgcgtgctgcgagtgccgcttacggacaagcagctcgaccagtatctgcaggtgctg
tcctcgccagtggtgcagggactctttgcgcagacagcaatgtacggctcgcgcaacggt
ggcctcgaccgcgacgggcgtgatagcactggctccctgcacgtggcggggccgcgggca
aagatggcgtctcgccgccacaacagcggcgtgcggctggagtcgttccgtgtcatgaat
cagctgcggcaaatctgcaaccacgccgacatctacgccgtgcagcaaggcgcggacgag
gaggaccgcatgatgcttggtcgtcgtggcgcggcggcgaagctgtctgctatttcggca
gcacgacctggtcagcaccgctccttccgcagcaacaaccccgtcgacctcctcggcagc
gggaagctgaacgcgctgctcatgatgctgaaggagtggcagtcgttcggccaccgcgtc
ctcgtcttctcgcagactcgcatgatgctcgatattatcgagaacatgtgcgagcagcaa
gcctaccgctacatccgcatggatggtgcgacgaacagccactatcggcaggagctgatg
gaccgcttcaatgaagacgtctccatctttgtcgccttgctgacgacgcgcgtcggcggc
atcggcgtcaacctcatcggcgccgaccgcgtcgtcattttcgacccggactggaacccg
atcacggacgttcaggcgcgtgagagggcctggcgtatcggccagaagagagaagtgtgc
gtctaccgccttatcacgagtggcagcgtcgaggagtcgatcctgcggcggcagctggcg
aagatgtacgtgacggacaaggtgctgaaggatccggagctgcaacgcttctttgacgtg
caagacggcttcatggagagccttctgctcggctccgagtacgcaaaccgcgtgccggtg
gacaagcggtacttactggcggcgcaccacctgcatagcgtctcggccggcgaccgcgac
cgcgcgcctggtcgggacagacacgcggcgctggggggggagtatggcaatgcggttcct
ggcgttgacgatgatgataacaccgacagcgacgtgagtgaaggaaacattggcgtcgcg
ggaagcaagggggagcagccgagaaaggagcgcgactttggcatgctggttcctcttaag
gacgagggcggcatcgacgatgtcggtgctgaccccgacgatacgggaggcgcggacgag
gacggcagtccagttggcatccctggcatgggcgacagaaataagaagacgagcaagggc
aaggaggtgtggcgtgagacacagatgctgcagaagctggtggattgccaggacgtctct
gtggcagggcacgaccgcgttgcgcaccgcctggcacgcaagaaggcagaagacatgata
cgccgcgtgtcctcatcggcgctcacgacggaggcgatgcgagagcagcagcgccagtat
agcctgttgcaagctattggggagaagaaggcgaaggaggcggcagaccgagaggagaag
gcgcgctactatcgtgaagagatagcagcagcagcagcagcagcggcgcggaagcgtcgg
catgagtag
DBGET
integrated database retrieval system
