Leishmania donovani: LDBPK_181080
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Entry
LDBPK_181080 CDS
T02289
Name
(RefSeq) vacuolar protein sorting complex subunit, putative
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ldo
Leishmania donovani
Pathway
ldo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LDBPK_181080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldo04131
]
LDBPK_181080
Membrane trafficking [BR:
ldo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LDBPK_181080
Hops complex
LDBPK_181080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
13393437
NCBI-ProteinID:
XP_003860121
UniProt:
E9BDT8
LinkDB
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Position
18:449540..452035
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AA seq
831 aa
AA seq
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MTWNKAADHLIVVSNTGFVHFYNYCGATAATSLPMEIPVVCTSCDNGFVALIDTATEAKL
VLVHLGPQKEYTVRELSLPQSIRQFMRTIALVALDESADKRQTTEVFLSYSPWSSNSFIC
RCVFGASNSSFLELDVPVEGGRVLEMCRSPTGRAVAFMMLDGSVYSTNSGFSEVSLLRRT
DATPESFVQMTWCGSHCVAYLQRMQYGSASGEAEGEGEDYSCSLFLMSVDEPDNSDCISD
LPFDGCLLPEKDGVWVLSRESLYFLQIAPLAVQHVFSVGSRAAGAMLVTTYDEFMTGDAS
AVRMLRNLEHTSGALVEAVAECVAAAGFEFDAAQQKRLLRIAAFGRTFCSLCDSSSFIAM
SKRLRVRNHLRLEPLGMIVTDQQLADLGEVRLLQRLTMCSEHQVAFCVAEALGSDLKPVM
LDWAMCRLARVSVHSKDEELEVAKQIVKKLKACRFTAFAELAQQAKVTGRGAAAVVLLDA
EVNPSQQVPMLLSIGEPEMALKRAIQAADADLVFTVMVNMIRSRGSAALATLTSHKISCD
LLLQYVGVCEGNQQLMAEYFNKHPRVQAYFHLRSYFREETRLGHALSQSMESGNWEMLQE
CKGVDIQAAIVSTKKAVEQSPRPQSTTTAFSPIVGGGIPFPASMIDERFLQLQSSLLDEQ
TQLMNEYKDYRFLQASAADTIRYALEHGRTSVAQRLKNAFCVPEKMFQRCMLSAYLCTSQ
WDLIDDMSGISSNKKTLLDGEAFVTALLSYKRPQQAKQYISRIPKIETRMEYYVLCSDWF
GAGADCKRSNDPDLLTQLKDRAKGNPDVLRQIEEGWSTMPHPSSISFPKFF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacatggaacaaggcagctgatcacctgatagtagtttcgaatacaggtttcgtccac
ttttacaactattgcggtgcaacggcagcgacgtctttgccgatggaaataccggttgtc
tgtacatcgtgcgacaacgggtttgttgcactgatcgacaccgcaactgaagcgaagctt
gtacttgtgcaccttggaccacagaaggagtacacagtgcgcgagctctctttgccgcag
agcattcgccagttcatgagaacgatcgctctcgtcgcccttgacgaaagcgctgacaaa
agacagacaacagaggtgtttctttcttattcaccgtggtcctcgaactcattcatttgt
cggtgcgttttcggagcctcaaactcgtctttcctagagctcgatgtgccagtcgaggga
gggcgagttctggagatgtgccgctcgcccaccggccgcgccgtcgcgtttatgatgcta
gatgggtcggtatactcaacgaatagcggattctctgaggtttctctgcttaggcgtact
gacgcgactccggaaagttttgtgcaaatgacgtggtgtggaagccattgtgttgcatat
ctacaacgaatgcagtacggcagcgcgtcgggtgaggctgagggtgagggtgaggactac
tcctgctcgctattcttgatgagcgtcgacgaacctgacaacagtgactgcatctccgac
ttaccgtttgatggttgtcttcttcccgagaaggacggtgtttgggtgctttctagagag
tcgctgtatttcttgcagattgccccgcttgccgtccagcacgtcttttctgtcggttcg
cgggccgctggggcgatgcttgtgacaacgtacgacgagttcatgaccggagatgcatct
gccgtgcgaatgctacggaatcttgagcacacctcaggcgcgctggtggaagcggtcgct
gagtgcgttgctgcagcaggcttcgagtttgacgcggcgcagcagaagcggctgttgaga
atcgccgcatttggccgaacattttgttccctctgtgattcaagctcattcatagccatg
tcgaagcgactgcgtgtgcgcaatcatcttcgtctcgagccgctcggcatgatagtgact
gaccagcagctcgccgacctcggcgaggtgcgccttctacagcgtcttactatgtgcagt
gagcatcaggtagccttttgtgtggcagaagctctcgggtcagatttaaagccagtgatg
ttggactgggcgatgtgtaggctggcgcgtgtctctgttcacagcaaggacgaggagctg
gaggtcgcgaagcaaatagtcaagaagctgaaggcgtgtagattcactgcattcgcagag
ttggcacagcaggctaaggtcaccggccgcggcgccgccgcggtggtactgctggatgca
gaagtgaatccgtctcaacaagtgccgatgctgctcagcataggcgagcctgaaatggcc
ttgaagcgcgccattcaagccgctgacgcggatctggtgttcactgtcatggttaacatg
atccgcagtcgcggctccgctgcgcttgccaccttgacatcgcacaaaatttcgtgcgat
ctgctgctgcaatacgtgggggtgtgcgaaggcaatcagcagctcatggcggagtacttc
aataagcacccacgagttcaggcctacttccatctgcgcagctactttcgcgaggaaaca
cgactgggacacgcgctgtcgcagtcgatggaaagcggaaattgggaaatgctacaagaa
tgcaaaggcgtggacattcaggctgctattgtctcgacaaaaaaggctgtagagcagagc
ccacgcccgcagtcgaccaccacggccttttctccgattgtcggtggcgggattccgttc
ccagcttccatgatcgatgagcgctttttgcagctgcagagcagcctcctcgacgagcag
actcagcttatgaacgagtacaaggactaccgcttcctgcaggccagcgccgccgacacg
atccgctacgccctcgagcatggacgcacttctgtcgcgcagcggctgaagaatgcgttt
tgtgtaccagagaagatgttccagcggtgcatgctcagtgcgtacttgtgcactagtcag
tgggacctcattgacgacatgagcggcatctcgtccaacaagaagacgctgcttgacggc
gaggcttttgttactgccttgctctcctacaagcgcccgcagcaggcaaagcagtatatt
tcgcgcattccaaagattgagacgcggatggaatactacgtgctctgcagcgactggttc
ggtgccggtgccgattgcaagcggagcaacgaccccgatttgctaacgcagctgaaggac
cgggccaaaggaaatccagacgtactgcgtcagatcgaagagggctggagcacaatgccc
cacccgtcaagcatcagctttcccaagttcttttag
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