KEGG   Leishmania donovani: LDBPK_250440
Entry
LDBPK_250440      CDS       T02289                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ldo  Leishmania donovani
Pathway
ldo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LDBPK_250440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ldo03009]
    LDBPK_250440
Ribosome biogenesis [BR:ldo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LDBPK_250440
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Utp13 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_VPS8 Ge1_WD40 WD40_RFWD3 Beta-prop_ACSF4 Utp12 PEP5_VPS11_N Beta-prop_DCAF12 Beta-prop_IFT122_2nd Beta-prop_IFT140_2nd UTP15_C
Other DBs
NCBI-GeneID: 13388621
NCBI-ProteinID: XP_003861374
UniProt: A0A504WXR2
LinkDB
Position
25:complement(126585..129638)
AA seq 1017 aa
MEGKNCFRTRWTQEPIFSGGALASLALPVSDPAASSALSTSAAPEECLVMACGDTVNVVR
ATSGEVLCRYTLPVEDVILHIDAVTVPKASDDGGKDATSGDEGEARAKRDASAAEKSATT
KKAPKKKAGAGKTVKPIEEDEENAGQAEKKVAVPSVAASSSDAAASQGDRELAAPAGSYV
AVGTRSLQVYVLRVDARVESPASPSPSPSAEKGVAADAASEKGNAAGAEGDDADVVGAAT
ASGTLVQYSIELQRNWTAAQHAISVVHFSQSGTYLVSGATDGSVKVWNVFHHHLTHNLVC
AHSSLVQSVCLDPSEAYLAVGSFEGHVTVFDFVAKRIVAAGRPHVQAVESMIFNDALTHV
YSIARDRRLALNKMMFSENRKSTELKEVRAIAVKEHVSSAAFESAGLLHVGAMDGVVSTY
RVSEDEAVQLVRRLPKPPSADAEDGAEEAFVRSLLVAGVPKGTNMRRLRDSVVQDAPHAP
DTSSLYVGDAGFSIQHLCPSSAECSQYEVTRTVVGFLDQLLDVKLFPEASPLHRAVVTNS
KDVRLYASDGCVSSKTLRGHSDVVLCCAVSSNGAWIATGAKDKEVRVWSTESCETVVRGV
GGHTAEVTSLSFNGRQTDTYLLLFSVSSDENVRMWDIGVPLAERVSAKQPRSRVEEIQHR
SGVNAAHTGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKKMYREASLKGHRRGISSLAF
SPVDRVLASASNDGSVRLWSLVSLTCLKSMQVDRTSVLQVGFFNNGTQIVTSNAEGVLRV
WAIASSESVWAAEAHTEKIWALAVEERPSSGETIFYSGAADGVLIATEDYTAEEVARVKE
DRHQMILQEQALSNALRKGEFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCENTLRGEL
LPALDAEQMTRLLQYTREWITNSRHCTVATLVLYVLISSRHFEAVAQVPSMASLIEPLLA
YTRKHSQRQHDLLRRTYYIDYVIRGLAPNVLTSLPPFVHHGEGRREEPPLAKRMRVE
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaagggaagaactgcttccgcacgcgatggacgcaggagcctatcttcagcggcggc
gcgttggcctctcttgcgcttccagtgtcagaccccgctgcgtcgtccgcactttccacg
tcggccgctccggaggaatgcctcgtcatggcgtgcggcgacaccgtgaacgtcgtgcgt
gcaacaagtggagaggtgctgtgcaggtacacgttgccagtagaggatgtgattctccac
attgacgccgtgacggtacccaaggcgtcggatgacggcggcaaagacgccacaagtgga
gatgagggagaggcgcgggcgaagcgcgacgccagcgctgcggaaaagtcggccacgacg
aagaaggctcccaagaagaaggccggagccggcaagacagtcaagccgatcgaggaggac
gaagagaacgctggccaagcggagaagaaggtggccgtgccgtccgtggcggcgtcctca
agcgacgcggctgcctctcaaggcgacagggagcttgctgcaccggctggcagctacgtt
gcggttggcacgcgctctctgcaggtctacgtgttgcgcgttgacgcccgcgtcgagtcg
ccggcctcgccctcgccctctccttcagcggagaagggtgtcgctgccgacgccgcttct
gagaaaggcaacgctgcaggggcggaaggcgatgatgcggatgtagtcggcgcggcaaca
gctagcggcacccttgtgcagtactcgatcgagctgcagcgaaactggacggcggcgcag
catgccatctcggtcgtgcacttttcccagagtggcacctacctcgtctcgggtgccacg
gatggcagcgtgaaggtgtggaacgtttttcaccatcacctcacgcacaacttggtgtgt
gcccacagctccctcgtgcagagcgtctgcctcgaccccagcgaggcctacctcgccgtc
ggctccttcgagggacacgtcaccgtcttcgactttgtggcaaagcggatagtggcggca
gggcgcccgcacgtgcaggcggtcgagtccatgatcttcaatgacgcgctcacacacgtc
tactcgatcgccagggatcgccgtctcgctctcaacaagatgatgttcagcgagaaccgc
aaatcgacggagctgaaggaggtgcgcgcgattgcagtgaaagagcacgtgtcgagcgcc
gccttcgagagcgccgggctacttcacgttggcgccatggacggcgtggtcagcacctac
cgcgtgagcgaggacgaggcggtacagcttgtgcgccggcttccaaagccgccgtccgcg
gacgccgaggacggcgccgaggaagcgtttgtgcgctctctgcttgtggccggcgtgcca
aagggcacgaacatgcgccgcctgcgcgactctgtggtgcaggacgcgccgcacgcgccg
gacacctcctccttgtacgttggcgacgcaggattcagcattcagcacctgtgcccctcg
tcggcggagtgcagccagtacgaggtgactcgcacggttgtcggctttctcgatcagctg
ctcgacgtgaagctgtttcctgaggcctcgccgctgcaccgggctgtggtaaccaacagc
aaggatgtgcgcctgtacgcctcggatggttgcgtctcctcgaagactctgcgcggccac
agtgacgtggtgctctgctgcgccgtgagcagtaacggggcgtggatcgccaccggggcc
aaggacaaggaggtgcgcgtgtggtcgaccgagagctgcgagacggtcgtgcgcggtgtt
ggcgggcacacagcggaggtgacatcgctatctttcaacgggaggcagacggacacctac
ctgctgctcttctctgtttccagcgacgagaatgtgcgcatgtgggacatcggcgtccct
ctggcggagcgtgtgtcggcaaagcagccgcggtcccgcgtggaggagatacagcaccga
agcggcgtgaacgcggcccacacgggccctatctacaccgtggctgttgcgcccaacgac
cagtacgtcgcgactggcggcaaggataagtcggtgaatgtgtggaacatcacaggcaag
aagatgtaccgcgaggcctccttgaaggggcatcggcgtggcatctcatcccttgccttc
tcgccggtcgatcgcgttctggcatcggcctcgaatgacggatcagtgaggctgtggtcg
cttgtgtcgctgacgtgcctgaagtcgatgcaggtggaccgcacctcagtactgcaggtg
ggcttcttcaacaacggcacgcagattgtcacgagcaacgcggagggcgtgctgcgtgtg
tgggccatcgcgtcctcggagtcggtctgggcggcggaggcgcacacggagaagatatgg
gccttggcggtcgaggagcgcccctcctcgggcgagacaatcttctactccggtgccgcc
gacggcgtgttgatcgcgaccgaggactacaccgctgaggaggtggcccgcgtcaaggaa
gaccggcaccagatgatcctgcaagagcaggcgctctccaacgcccttcgcaagggcgag
ttctcagaggcgtttatgctggccctgcgactgagtcacccgcgtcatctccgccaagtg
ctcgtgcgctggtgcgccaaggacgcacgccagtgcgagaacacgcttcgcggcgagctt
ctgcccgcccttgatgcggagcagatgacgcggctgctgcagtacacgcgagagtggatc
acgaacagccgtcattgcacggtggctactctggtgctctacgtgcttatctcctcacgc
cactttgaggctgtcgcgcaggtgccgtcaatggcgtcgctgatcgagccgctgctggct
tacacgcgcaagcacagccagcgccagcacgacctgctccggcgcacgtactacatcgac
tacgtcatccgcggtcttgccccgaacgtgctgacctcgcttccgccattcgtgcatcac
ggtgaagggcggagggaggagccgccgctggcaaagcgcatgcgcgtcgagtga

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