Leishmania donovani: LDBPK_251780
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Entry
LDBPK_251780 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_251780
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_251780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_251780
03041 Spliceosome [BR:
ldo03041
]
LDBPK_251780
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LDBPK_251780
mRNA degradation factors
5'-3' decay
Lsm complex
LDBPK_251780
Spliceosome [BR:
ldo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LDBPK_251780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
13388754
NCBI-ProteinID:
XP_003861508
UniProt:
A0A3Q8IFD7
LinkDB
All DBs
Position
25:complement(667931..668326)
Genome browser
AA seq
131 aa
AA seq
DB search
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGGV
VDEGVSTAVSSGGTASGALPPLEEVQLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSS
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccagtacctgcgcaagcgtgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccacgcagccgatcagctgctgaacatcgtactcacatcctgcgtcgag
cgcactggcgcgccgtacgatttcgacgatggcgcggccgaagaggacaacggtggcgtt
gtcgatgaaggtgtctccacggctgtcagcagcggtggcactgcaagcggcgctctgccg
cccctggaagaggtacaactaggcgtgatgatgctgcgcggtgccgacgtcgtttccatt
gctgccatcgacgtgtacgaggaggctggcacaaacgtgaaggattggcgaggacgggat
atgccgcctgctactgctgtagcgaggtcgtcgtga
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