KEGG   Leishmania donovani: LDBPK_251780
Entry
LDBPK_251780      CDS       T02289                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ldo  Leishmania donovani
Pathway
ldo03018  RNA degradation
ldo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LDBPK_251780
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LDBPK_251780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ldo03019]
    LDBPK_251780
   03041 Spliceosome [BR:ldo03041]
    LDBPK_251780
Messenger RNA biogenesis [BR:ldo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LDBPK_251780
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LDBPK_251780
Spliceosome [BR:ldo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LDBPK_251780
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 13388754
NCBI-ProteinID: XP_003861508
UniProt: A0A3Q8IFD7
LinkDB
Position
25:complement(667931..668326)
AA seq 131 aa
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGGV
VDEGVSTAVSSGGTASGALPPLEEVQLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSS
NT seq 396 nt   +upstreamnt  +downstreamnt
atgctctcccagtacctgcgcaagcgtgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccacgcagccgatcagctgctgaacatcgtactcacatcctgcgtcgag
cgcactggcgcgccgtacgatttcgacgatggcgcggccgaagaggacaacggtggcgtt
gtcgatgaaggtgtctccacggctgtcagcagcggtggcactgcaagcggcgctctgccg
cccctggaagaggtacaactaggcgtgatgatgctgcgcggtgccgacgtcgtttccatt
gctgccatcgacgtgtacgaggaggctggcacaaacgtgaaggattggcgaggacgggat
atgccgcctgctactgctgtagcgaggtcgtcgtga

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