Leishmania donovani: LDBPK_270920
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Entry
LDBPK_270920 CDS
T02289
Name
(RefSeq) vesicular transport protein (CDC48 homologue), putative
KO
K14571
ribosome biogenesis ATPase
Organism
ldo
Leishmania donovani
Pathway
ldo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDBPK_270920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_270920
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LDBPK_270920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_33
AAA_14
RNA_helicase
AAA_2
AAA_28
TIP49
IstB_IS21
nSTAND3
ABC_tran
Mg_chelatase
AAA_3
NPHP3_N
TsaE
AAA_11
AAA_18
NACHT
AAA_24
AAA_17
Zeta_toxin
AAA_7
Vps4_C
Parvo_NS1
ATPase_2
NB-ARC
Sigma54_activat
NTPase_1
Rad17
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
13389209
NCBI-ProteinID:
XP_003861948
UniProt:
A0A3S7X0L3
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All DBs
Position
27:complement(381737..383737)
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AA seq
666 aa
AA seq
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MPGMSDRLKDRLKQMARQTPNGYRKQRPGSGPRHFADDNYPFHAKRPRDEEEEGPQSSKS
GSSRVHSGKEAGKSASGDGEGEVLGVIPKITLEDMGGLAKELPVIKELIELPVRMPHLFN
CLGADPPCGVLLHGPPGVGKTKLVHAIAGSLQVPLFFVAAPEIVSGISGDSEAKLRNLFM
DAIAAAPSIVFIDEIDTIAGRREDAQRAMESRIVGQLLTCMDQVSQAWRQHNKVVCVMGA
TNRPEALDTALRRAGRFDREIALGIPSIDERQSILSIICAKINLSDGVDFFELANMTPGY
VGADLHLLVKEACILAIRRKYKELDERGAVDDVKTEELSGFCVTFDELKEATTRVQPSAM
REGFTTIPNVSWDDVGALEDVREELMTSILQPIRAPKLHHRFGLDHPVGVLLYGPPGCGK
TLVAKAIANQSGANFISIKGPELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAP
RRGSDRANPSSERVVNQLLTELDGVEGRKDVYVIGATNRPDMIDSAMLRPGRLDKLLYVP
LPSPAQRESILRTHARKYPVDAEVSLERLAHDERLTGFSGADLAALMREASLTALKGVYK
SHTKDELEELERDITGKSADTADLPTITADNFEASLAKIKPSVSAADRANYENMSIEIRN
NAKNTD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcatgagtgaccgcctcaaggacaggctgaagcagatggctcggcagaccccc
aacgggtaccgtaagcagcgccccggcagcggcccacggcacttcgccgacgacaactac
ccttttcacgcaaagcggccgcgtgacgaggaggaggaagggccgcagagtagcaagtcc
ggcagcagccgtgttcacagtggcaaggaggcgggaaagagcgccagcggcgacggggag
ggcgaggtgctcggtgtcatcccgaagatcaccctcgaagacatgggcggcttggccaag
gagctgccggtaataaaagagctcattgagctgcccgtccgcatgccgcacctctttaac
tgcctcggtgcagatccgccgtgcggcgtcctgctgcatggcccgccgggtgtcggcaag
acaaagctcgtccacgccatcgccggctcgctgcaggtgcccctcttttttgtcgcggcg
ccagagatcgtctccggcatcagcggtgacagcgaggcaaagctgaggaacttgttcatg
gacgccatagcggcggcgccgagcattgttttcatcgacgagatcgacaccatcgcgggc
cgtcgcgaggacgcccagcgcgcaatggagagtcgcatcgttggacagctgcttacgtgc
atggatcaggtgtcgcaggcctggcgacagcacaacaaggtggtttgcgtcatgggggcg
acaaaccgcccagaggcgttggacacggcgctgcgccgcgccggccggttcgatcgggaa
attgccctcggcatcccctcaatcgacgagcgacagagcatcctcagtatcatctgcgcg
aaaatcaacttgtccgacggcgtcgatttctttgagctcgccaacatgacccccggctac
gtcggcgcagacctgcaccttctcgtcaaggaggcttgcatcctcgccatccgccgcaag
tacaaggagctggacgagcgtggcgctgtggacgatgtaaagacggaagagctctccggg
ttctgcgtcacattcgatgagctgaaggaggcgacgacgcgggtgcagccgtcggcgatg
cgagagggcttcacgacgatcccgaacgtctcgtgggacgacgtcggcgccctcgaggac
gtgcgcgaggagctcatgaccagcatcttgcagcctatccgcgccccgaagttgcatcac
cgcttcggtctcgaccaccccgtcggcgtgctgctctacggcccaccgggctgcggcaag
acactggtcgcaaaggcaatcgcgaaccaatcgggcgccaactttatctccatcaagggt
ccagagctgctcaacaagttcgttggcgagagtgagcgcagcgtgcgcatggtcttcgcg
cgtgggcgggccagcgccccatgcgtcctctttttcgacgagctggatgcactggcaccg
cgccgcgggtcggaccgggcaaacccgagcagcgagcgcgtagtgaaccagctgctgacc
gagctggacggtgtggaggggcgcaaggatgtttacgtgatcggggccacgaaccgcccc
gatatgatcgattctgccatgctgcgcccaggtcgcctggacaaactgttatacgtgccg
ctgccgtcgcctgcgcagcgtgaatcgattctgcggacgcacgcccgcaagtacccggtg
gatgccgaggtgagcctggaaaggctggcgcatgacgagcggctcaccggcttcagcggc
gccgacttggccgccctaatgcgcgaggcgtcgctgaccgcactgaagggcgtgtacaag
tcccacacgaaagacgagctggaggagctggagcgcgacatcaccggcaagagcgccgat
acggcggatctgcccaccattacggcagacaacttcgaggcgagcttggcaaagatcaag
ccgtcggtgtctgcggcggatcgggcaaattatgagaacatgagcatcgagatacgcaac
aacgccaagaataccgactaa
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