Leishmania donovani: LDBPK_271010
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Entry
LDBPK_271010 CDS
T02289
Name
(RefSeq) intraflagellar transport protein IFT88, putative
KO
K16474
intraflagellar transport protein 88
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ldo03037
]
LDBPK_271010
Cilium and associated proteins [BR:
ldo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
LDBPK_271010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_16
TPR_2
TPR_19
TPR_12
TPR_6
TPR_8
TPR_14
TPR_7
ARM_TT21_5th
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
TPR-S
TPR_17
ARM_TT21_N
HAT_PRP39_C
TPR_10
DUF7823
TPR_EMC2
ARM_TT21_C
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
13389218
NCBI-ProteinID:
XP_003861956
UniProt:
E9BJ35
LinkDB
All DBs
Position
27:complement(412496..414931)
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AA seq
811 aa
AA seq
DB search
MNGNDEDIYAAFQTPDIGSNPWTTSTNPFEAPAQEAMGGNPLMQAPPSQWGRAGMGSAWG
VPGSRMNTRGCGIPGAARPMTSNRAVGFNSASNGAAAVLFDPTGQARMANMAMGPAPPLK
KRSENSQEEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERLLCKKREQYGL
AEQINVDLTYAVHFNLAVQYQNHQLYTEALNTYNLIIRNVQFPQAGRLRVNMGNIYLAQQ
NYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSYETVVEGNGDANA
TFNLILCYYALGETEKMKRTFTRLMNCRLAGLDGEEDFEEEEKRKDVLVDDSLSRMRKER
RARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASELEMCKNLNYLK
HKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLSLVANQYNAKAL
VNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQAL
VDSSEVLYQIADLSDLVGDPAALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYY
LEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGD
YVQAKRLYEQVHRKYPDNIECLNYLVQLCKDAGLNEEANEWFKATKKVERQQIHSSSSSV
GGESGDDDVESSVEGGNNINGHHRRRTSGTAAPDAAVAGRRAGGGAAADKDFSVGLSDDD
IVDGKANQNGAKRPKKAKNSDSDDEIDLPGI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaacgacgaggatatctacgcggcgttccagacgccggatattgggtcgaac
ccatggacgacgagcacgaaccccttcgaggcccctgcgcaagaggctatgggcggcaac
cccctcatgcaggcccctccttcgcaatgggggcgcgcgggcatgggctctgcctggggt
gtgccgggcagccgcatgaatacaaggggctgtggtatccccggcgccgcgcgtcccatg
acgtctaaccgcgctgtcggcttcaacagcgcaagcaacggcgccgctgccgtcctcttt
gaccccaccggccaggcgcgcatggcgaacatggcgatgggcccggccccgccgctgaag
aagcggagcgagaacagtcaggaggaggagctggctgagatggagaagcaggtgaacaag
ctgattgaggagagcgccatgctggctctgcagaaggactacggcgcggcactcgagaag
gccaaggacgccggaaagctggagcggttactctgtaaaaagcgcgagcagtacgggctc
gccgagcagatcaacgtcgaccttacctacgcagtgcacttcaacttggcggttcagtac
caaaaccaccagctgtacactgaggccctcaacacgtacaacctcatcattcgcaacgtg
cagtttccacaagccggccgcctgcgggtgaacatgggcaacatttatcttgcgcagcag
aactacctcctagccatcaagatgtaccgcaaggtgctcgacgagacaccgaccgccgga
aaggagctccgctatcacctctgccgcaatatcgccaacgcgtttgtgaagctgggccag
tacagggacgccgcgaacagctacgagaccgtggtggagggcaacggcgatgccaacgcc
acgtttaacctcattttgtgctactacgcgctgggcgagacggagaagatgaaacggacc
ttcacgcgcctcatgaattgccgcctcgcgggcctcgacggcgaggaggactttgaggag
gaggagaagcggaaagacgtcttggtagacgacagcctgagccgcatgcgcaaggagcgc
cgcgccagatacctcaagtacatcatcacggcagcccgcttgattgctccagtgctgcac
aaggactggtgcgtcggctacgactacatcatctctcagctgcgcacctacgagatgcgc
gacccgacctcgcacgtggcgagcgagctggagatgtgcaaaaacctgaactacctcaag
cacaagcgctatcaggaggcgatcaacggcctgaaggagtttgagaagaaggacaggagc
ctgcgagcacgggcagccacgaacctggcgtacctctacttccttgagggcgactacgag
aacggggagcagtacagcgacctcagtctcgtcgcgaatcagtacaacgccaaggcactg
gtaaacaaaggcaacttctcctttgtcaagaaggactacgacaaggcgaaggagctgtac
aataaagcgctggcggtggaggccgacaacgtggaggccatctataaccttggcttggcc
gccaagaagctagggctgtacgaggaggcggtgcgcatgttcaagcgcgtgcaggcgctc
gtggacagtagcgaggtgctgtatcagattgccgacctcagcgaccttgtcggcgacccg
gcagcgctggagtggtttaaccgcctcattggccgcgttccgacggacccgaacgcgctg
gcccgcatcggctccctctacgcccgcgacggcgacgatgtgcaggcgtttcactactat
ctggaggcctaccgttactaccaggtaaacatggacgtcatctcctggctcggcgcgtac
ttcgtgaagaacgaagtctacgataaggcggtgcagttcttcgagcgcgcttcgcacatc
caaccgcaggaggtgaagtggcagctgatggtggcctcgtgccaccgccgccgcggcgac
tacgtgcaggcgaagcggctctacgagcaggtgcaccgcaagtatcccgataacatcgag
tgtctcaattacttggtgcagctctgcaaggacgctggcctcaacgaggaggccaacgag
tggttcaaggcaacgaaaaaggtggagcggcagcagatccacagcagcagcagcagcgtc
ggcggcgagagcggcgacgacgacgtagaatcctccgttgagggcgggaacaacatcaac
ggccaccatcgcagacgcacaagcggcacggccgcacccgacgcggcagtggcaggccgc
cgcgcaggtggtggtgctgcggccgacaaagacttttccgtcggcctctccgacgacgac
atcgttgacggcaaagcaaatcagaatggcgccaagaggccgaagaaggcgaagaacagc
gactcagacgatgaaatcgacttgcccggcatttag
DBGET
integrated database retrieval system
