KEGG   Leishmania donovani: LDBPK_280120
Entry
LDBPK_280120      CDS       T02289                                 
Name
(RefSeq) DNA-direcetd RNA polymerase II, subunit 9, putative
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ldo  Leishmania donovani
Pathway
ldo03020  RNA polymerase
ldo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LDBPK_280120
  09124 Replication and repair
   03420 Nucleotide excision repair
    LDBPK_280120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ldo03021]
    LDBPK_280120
   03400 DNA repair and recombination proteins [BR:ldo03400]
    LDBPK_280120
Transcription machinery [BR:ldo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     LDBPK_280120
DNA repair and recombination proteins [BR:ldo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LDBPK_280120
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS zf-Sec23_Sec24 HNH_5 Zn_ribbon_8
Other DBs
NCBI-GeneID: 13386849
NCBI-ProteinID: XP_003862113
UniProt: A0A3S7X159
LinkDB
Position
28:33083..33505
AA seq 140 aa
MEAEEITQVSIGNATTAPMLFCSRCNNLLYPECDDDNYSMTWRCNYCKTTEQHDDCKLVH
VMNLKMKADAIGGMDLIAEFANDPTAQRDPEKPCPKCGKKGVACFVNPLGQPQEDMTLYF
ACSDTVCRHVWKGAAAEDQN
NT seq 423 nt   +upstreamnt  +downstreamnt
atggaggcggaggagatcacgcaggtgagcattggcaatgccaccaccgcaccgatgctt
ttctgctcacgctgcaacaacctcctttaccccgagtgtgatgatgacaactacagcatg
acgtggcgctgcaactactgcaaaacgactgagcagcacgatgactgcaagctcgtccac
gttatgaacctgaagatgaaagcggacgcgatcggtggcatggatctcattgccgagttc
gccaacgacccgaccgcgcagcgtgatcctgagaagccttgccccaagtgcggcaagaag
ggcgttgcttgcttcgtgaacccgctcggccaaccgcaggaggacatgacactttacttt
gcttgctctgatacggtgtgtcgccacgtttggaagggtgctgccgccgaggaccagaac
tag

DBGET integrated database retrieval system