Leishmania donovani: LDBPK_280290
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Entry
LDBPK_280290 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
ldo
Leishmania donovani
Pathway
ldo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDBPK_280290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_280290
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LDBPK_280290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR55
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR75_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
13386866
NCBI-ProteinID:
XP_003862130
UniProt:
A0A3Q8IGL7
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Position
28:90886..93276
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AA seq
796 aa
AA seq
DB search
MQSCFAACSQVVCVAEDTAVAFYAPKSLRKFRVERLNGSRVCGMYVQIISGAKAVLHVID
AEATLFEFAIEGGAPSLVRTVSIRLPRASLVPSTSTEENEEVSDRRHQGLTSWTANGEAA
ATASVVVAAQFHVQQAQLFAVLLTKVGVYEAALGSASPVGATSAPSTVVVHTFKEAVPHG
YLSVGQFTGLVVVAVPHAREFFYSLFTDRLSAHQPHRPSCPPLLPRAVNVQIQSIACSPT
STSVAVGGRRGELLIYVEVQEAHCFADHWHHTPLTALAFALDGSAVYTGGRESVLLIWDL
VSYGHKKVKVQLGTLQGITLFSSEGAQLLLSCGTSTLAVADLLQMRVTTSAEGIEWAAED
VCTGLVVEQWRGSPAVILTGMPNVLRVCDPYTQQSIYSLHVSSQMETIPSPPRHGIQFVG
ILNDSRSLVTYESFSSTVLPPLLRFWEYDAPLKQHVETQTVYSPHRSAVLALEVEKRGRR
VFTLSSEAMKCWAQTAFTAQDTYGTPTGGWHNHSAMATPSQQVQTMALSADGSLCFVADD
CLHVYSVQDCRPGERWPLLQLLPQYTETQPLRRIVVSPDSRHAVAAGKRHIFFWALDRCS
EEPTVFSVGETCITALSAFTDTTVVAALEDTSLVELRCCAAGSSKGPQLGEMVRRIANAS
RFPLRHIAPLHMNGQRLAAVDAVTGFKILQLPTGAAAVAQPSVYEWAGTSDEASGAGAVA
EGDKTARLQLQSFFKEVTSIQDSQEVLMTANQEGALATAQQTAQADRWLAEVLGEPAYTV
PPMSAVLSTYLQRRPC
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcttcgccgcctgctcacaggtagtctgcgtggcagaggacacggcggtg
gcgttttacgcgcccaagtcgctgcggaagttccgcgtggagcggctcaacggatcgcgc
gtatgcgggatgtatgtgcagatcatttctggcgcaaaggcggtgctgcacgtcatcgat
gccgaggctacgttgttcgagtttgcaatcgagggtggtgcgccatccttggtgcgcaca
gtctcgattcgactcccacgggcctcacttgtcccgtccacctcaactgaagagaatgag
gaggtttcagataggcggcatcagggcttaacgagctggacggcgaacggcgaggcggcc
gccaccgcctccgtcgtcgtggctgctcagttccatgtgcagcaggcacagttgtttgct
gttctgctcacgaaagtcggcgtttacgaggccgcgctaggctctgcctcacccgtgggg
gcgacgagcgcgccgtcgacggtggtggtgcacaccttcaaggaagccgtgccacacggg
tatctttctgttggtcagtttactggcctggtcgtcgtagccgtccctcacgcgcgtgag
ttcttctactccctcttcacggaccgcctctccgcccaccagccgcaccgcccgtcttgt
ccgcctctcctgccgcgcgccgtaaatgtgcagatccagagtattgcctgcagtccaacg
agcacgtcggtcgccgtcggtggcaggcgcggtgagctgctcatctacgtggaggttcaa
gaggcacactgctttgccgaccactggcatcacacacctctgacagcgcttgccttcgct
ttagatggcagcgcagtgtacactggcggccgcgagtctgtgctactaatctgggatctg
gtgtcctacggccacaagaaggtcaaggtgcagctgggcacgctgcaagggataacgctc
ttcagcagtgaaggggcgcagctgttgctgtcatgcggcacgtcaacgctcgccgttgcg
gacttgctgcagatgcgcgtgacgacgtcggcggagggcatcgagtgggccgctgaggat
gtgtgcaccgggctcgtcgtcgagcagtggcgcgggagcccggcggtgattctgacgggg
atgccgaatgtgctgcgtgtctgcgacccgtacacgcagcagtctatctactcgctccac
gtgtcctcgcagatggagacgatcccgagcccgccccgccatggaattcagttcgtgggc
attctgaacgacagccgttctctcgtgacgtacgagtccttctcctcgacggtgctgccc
ccgctgctgcggttctgggagtatgacgcgccacttaagcaacatgtggagacgcaaacc
gtctactccccgcatcgctccgccgtgctggctctggaggtggagaagcgagggcggcga
gtgttcacgctgagctccgaggcgatgaagtgctgggcacagactgccttcaccgcacag
gacacatacggtaccccgactggcggctggcacaaccactcagcgatggcgactccctcc
cagcaggtgcaaacgatggccctctccgcagacggctcgctctgcttcgttgcggatgac
tgtctgcacgtgtactcggtgcaggactgcaggcccggcgaacgctggccactgcttcaa
cttctgccgcagtacacggaaacgcaaccgctgcgccggatagtcgtgtcacccgactcc
cggcacgctgtggcagctgggaagcggcacatcttcttttgggcactggacaggtgttca
gaggagccgaccgtattcagcgtgggcgagacgtgcatcactgccttgagtgccttcacg
gacacgacggtggtagccgccctcgaggacacatcccttgtggagcttcgctgctgcgcc
gccggcagcagtaagggcccgcagctgggtgagatggtgcgtcgtattgcgaacgcctct
cgttttcctttgcgccacatcgccccactgcacatgaatggccagcgtctcgctgctgtg
gacgccgtgacgggctttaagattttgcagctgcctacaggagccgcggccgtggcgcag
ccctccgtgtacgagtgggccggcaccagcgatgaggcgagcggcgcgggggccgtggca
gagggtgacaaaaccgcacgacttcagctgcagtccttcttcaaggaggtgacttcgatc
caagactcacaggaggtgctgatgacagcgaaccaagaaggcgccttggcaacggcgcag
cagacggcgcaggcggaccggtggctggctgaggtgctcggtgagccggcctacacggtg
ccaccgatgagcgctgttctctccacgtacctgcagcgtcggccgtgctag
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