Leishmania donovani: LDBPK_290140
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Entry
LDBPK_290140 CDS
T02289
Name
(RefSeq) DNA-directed RNA polymerase I-like protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ldo
Leishmania donovani
Pathway
ldo03020
RNA polymerase
ldo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDBPK_290140
09124 Replication and repair
03420 Nucleotide excision repair
LDBPK_290140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldo03021
]
LDBPK_290140
03400 DNA repair and recombination proteins [BR:
ldo03400
]
LDBPK_290140
Transcription machinery [BR:
ldo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LDBPK_290140
DNA repair and recombination proteins [BR:
ldo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LDBPK_290140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Motif
Other DBs
NCBI-GeneID:
13387170
NCBI-ProteinID:
XP_003862432
UniProt:
A0A3S7X218
LinkDB
All DBs
Position
29:complement(49067..50080)
Genome browser
AA seq
337 aa
AA seq
DB search
MKLEIVECVKNEHAAGETLTFQLSEVDSSFANALRRVMLAEIPTLAIEYVTIRQNTSVLP
DEMIAHRLGLVPLFSEKAKRLNFPQDCGCGGSGCPDCQITGSLKVQCPPNQHSKQVFIGD
SLQIDDAEVYPVSAEEHGIWLVTLGRSQVLDLHVVIRKNIAKTHAKFMPVATVAMRYAPE
IILNPNGFQTLGKAKAREWVARCPRNVFRFVERTGQVEVQDEDACIFCRECTSQEPPFDR
LPEPLVFVRQKKNKMGYFDFTFTVESTGVLPVLQIVYDAVTVVRRKLQRVSEGLMKDPNA
DGVKTRTIGQSTTAPVVPNADAVRKGAEEDNLDFTMQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagattgtcgagtgcgtgaagaacgagcacgccgcgggcgagactctcacg
tttcagctcagcgaggtggacagctcttttgccaacgcgctgcgacgtgtcatgctggcg
gagattccgacgctcgccattgagtatgtgacgatccgccagaacacgtcggtgctgccg
gatgaaatgatcgctcaccggcttggccttgtgccgctcttctccgagaaggcgaagcgc
ttaaactttccgcaagattgtggctgtggcgggagcgggtgcccagactgccagattact
ggttcgctgaaggtgcagtgcccgccgaaccagcatagcaagcaggtgttcattggcgat
tctctgcagatcgatgacgccgaggtgtacccggtgagtgcggaggagcatggcatttgg
cttgtgacgctgggacgcagccaggtgctggatctgcatgtcgtaattcgtaagaacatt
gccaagacgcacgccaagtttatgccagtggcgacggtggcgatgcgctacgctcctgag
atcattctcaaccccaacgggttccagaccctcgggaaggcgaaagcgcgtgagtgggtg
gcccgctgcccgcggaacgtctttcggtttgtcgagcgcactggccaggtggaggtgcaa
gacgaggacgcctgcatcttctgccgcgagtgcacgtcgcaggagcccccgttcgacagg
cttcccgagccgctcgtgtttgtgcggcagaagaagaacaagatgggctacttcgacttc
accttcacagtggagtcgaccggggtgctaccggtgctgcagattgtgtacgatgccgtg
acggtggtgcgcaggaaactgcaacgggtgagtgagggcctcatgaaggacccgaacgcg
gacggtgtaaagacccgcacgattggccagtccacgaccgccccggtcgtgccaaacgcg
gatgccgtgcggaagggcgcggaggaggacaaccttgatttcaccatgcaataa
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