Leishmania donovani: LDBPK_290560
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Entry
LDBPK_290560 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_290560
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_290560
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
LDBPK_290560
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
LDBPK_290560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
13387212
NCBI-ProteinID:
XP_003862473
UniProt:
E9BKK2
LinkDB
All DBs
Position
29:complement(206734..209376)
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AA seq
880 aa
AA seq
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MSALMERPPEATEIAQYRASMEAATLLTLSTSPAVAESQPTGGSTMRPKKPAHHDASVTS
RLMGKGSPTTLTHSFLEAVLNGRAKTTRALAPGTPLVHTDTTSGTTVSLSGVASPTASPG
NGARADQRSASSGAATASKATERTSAQPSAPKPLGLVPTDTGTIPQLLSLLREIALSCAS
LDTLDKVAGGSASFLRGTDAAPFHTKPLGAASAPVTAAVARGAGTGGGSATSGGRSAAPP
TAIATAHPSHDPDITEEERWHRVCAHFEVLRGLVLNEHELTRALDEVLGVEWRGVSTPPD
LHAYEEGTAVAPSASPAVSADGLHNPPAATLLGAPVAAAARSIVPVTPAPADHETPPAPS
FTAGCVPGGAGTPRTSTAAASSAVTPMPITTSSHTGTNATGVIGVKSAASPGTTLSYSAR
PSQSRTPPSVQKPRSASFFSAAPIPVAHSPAATANDAASSSMKQLSESSSTYSPSQHVAM
MLDRGTTPPPASRTQDEGEAGLANFPSTPLSEAAAPYQPSASLMNTSPHGGNASTSNSAP
FHLETREEMLRRRSAAPNAFYASVSHRGTTHFVGGPPSAATTPRTFMSSSLAPGMPPFSL
NGGAGGARSVPVSPLMSYSSPFGALPCPYDYLLVLDFEATCEEHPPPNYLYEIIEFPVVV
VDARLQRVVAEFHRFVRPRYKRELSPFCQKLTGMRQEDVDTAASLEEVIRQFERWLSHTL
PPHARCMFVTDGPMDLREFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAM
LEVLHLPFEGRLHSGLDDARNIASIVIGLLHYGCSFCEVPLNRLPFNGLLLTGANSVSGS
APLLLPPSTAPAASCHTRSSEASPTAISAPYSVNEDDHSR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcactcatggagcgtccccctgaggccactgagattgcgcagtaccgcgcgtcg
atggaggcggcaacactgctgacattgtccacttcgccagctgtggcggagtcgcagccc
acgggtgggtctactatgcgaccgaaaaagccagcgcaccatgacgccagcgtcacatct
cgactgatgggcaaaggcagtcctacgacgttgacgcactccttcttggaggccgttctg
aacggccgagcgaagacaacgcgcgcgttggcccctggcacgccactggtgcacaccgac
acgacgtctggcacaacagtctctctctcgggagtagcgtcgcccaccgctagccccggc
aacggcgctcgtgctgaccagcgcagcgcgtcctccggcgccgccactgcttccaaagcg
acagagaggacttcagcgcagccatctgcccctaagccgctggggctggtgccgaccgac
acgggcaccattccgcagctgctgagtcttctgcgtgagatagcgctctcatgcgcgtcg
ctggacaccctcgacaaggtggcaggtgggtcggcgtcctttttgagaggcacagacgct
gcgcctttccacacaaagccactgggcgccgccagcgcgccggtcacggcggccgttgca
cgcggcgcgggtactggtgggggcagcgccacctctggcggtcgctcggcagcaccaccc
acggcaattgccactgcacatccttcacacgaccccgacatcacggaagaagagcgctgg
catcgcgtatgtgcccacttcgaagtgctgcgcgggcttgtcctgaacgagcatgagctg
acacgtgcgctggacgaggtgctcggcgtggaatggcgcggcgtgtcaacgccgccggac
ctgcacgcgtacgaggagggtactgccgtggcgccgagtgcgtcaccggcggtgtcggcg
gatgggctgcacaatcctcctgcggcaacgctcttaggcgcaccagtcgctgcggctgca
cggtcgattgttcctgtgacgcctgcgccagctgatcacgagacgccaccagccccgtcc
ttcaccgctggctgtgtgcctggcggggccggcacgccgaggacatctaccgctgccgct
tcttctgccgttactcccatgccgatcacgaccagctcacacaccggcacgaatgccacc
ggcgtgatcggtgtgaagtctgctgcgtcgccagggacgacgctcagctacagcgcacgc
ccctcccaaagccgcaccccgcccagtgttcagaagccgcgaagcgcctcgtttttttcg
gcagcaccaatcccggttgcgcacagccctgccgccaccgcgaacgatgcagcctcctcc
tcgatgaagcagttgtccgagagcagctcaacgtactcgccgtcgcagcacgttgccatg
atgctggatcgcggcacgacgccaccgccggcgtcgcgcacacaggatgaaggcgaggcc
ggactcgccaactttccttcgacaccgttgtctgaggcagcagcgccgtatcagccctcg
gcgtcgctcatgaacactagcccgcacggcggcaacgcgtccacgtcgaacagcgcgccg
tttcacctggaaacacgcgaggagatgctgcggcgccgcagtgcggcaccgaacgcgttt
tacgcttccgtatcgcacagaggcaccacgcatttcgtcggcggacctcccagcgcggca
acgaccccacgcacgttcatgtcgtcctcgctggcgccgggcatgccgccattctcgctc
aacggcggtgctggcggggcgcgcagcgtgccggtgtcgccgctgatgtcgtactcctcg
ccgttcggcgccttgccatgcccttatgattatctgcttgtgctggacttcgaggccacc
tgcgaggagcacccgccgcccaactacctgtacgagatcatcgagttcccggtggtggtc
gtcgatgcacgactgcagcgtgtcgtggcggagtttcaccgatttgtgcgcccgcgatac
aagagagaactcagccccttttgccagaagttgaccgggatgcggcaggaggacgtggac
acagcagcgtcgcttgaggaggtcatcaggcagtttgagcgctggctctcccacacgctg
ccgccacatgcccgctgtatgttcgtgacggatggcccgatggacttgcgcgagttcatg
tactatcacagcgtttctcgccaaggcatccgcttcccctcgctcttctaccagtttatc
gacgtgaagcagacctttgcctgcttcttccggtgctcgcaggggaagatcaaggcgatg
ctggaggtgctgcatcttcccttcgaggggcggctgcatagcgggctcgacgacgcgcgc
aacatcgcgtccatcgtaattggtctccttcactacggatgcagtttctgtgaggtgcca
ctaaaccgcctgccgttcaatggactgctgctgaccggggcgaacagcgtgagcggatcg
gcacccctcttgctaccaccctcgacggcgcccgccgcgtcctgccacacacgatcgtcc
gaggcgtcacccacggccatctctgctccctactccgtgaacgaggacgaccactctcgc
tag
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