Leishmania donovani: LDBPK_300560
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Entry
LDBPK_300560 CDS
T02289
Name
(RefSeq) nuclear cap binding protein, putative
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ldo
Leishmania donovani
Pathway
ldo03013
Nucleocytoplasmic transport
ldo03015
mRNA surveillance pathway
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_300560
09122 Translation
03013 Nucleocytoplasmic transport
LDBPK_300560
03015 mRNA surveillance pathway
LDBPK_300560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_300560
03041 Spliceosome [BR:
ldo03041
]
LDBPK_300560
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
LDBPK_300560
Spliceosome [BR:
ldo03041
]
Common components
Common spliceosomal components
Cap binding complex
LDBPK_300560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
13385477
NCBI-ProteinID:
XP_003862770
UniProt:
A0A504XDG3
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All DBs
Position
30:complement(177213..177779)
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AA seq
188 aa
AA seq
DB search
MSSDLVDTVPRMEYVDRHELLRSLLTTEEFRERRQEQLNYSATVYVGNLSFYTTEEQVYN
HFSPCGHIRDIVMGLNEATRCPCGFCFVVFESQAAAVLAVHGLDGSLLDDRVVSVSWDVG
CDGSRRWGRGAHGGQVVDGVRQNLDEGRGGLGALRRDALGVPASTAEDELVAYDWVEAPP
KRRGAHTK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgatttggtggacacggtccctcgaatggagtatgtggatcgccacgagttg
ctccggtctctcttgacgacggaggagttccgggagcggcggcaggagcagctcaactac
agcgccaccgtctacgtgggcaacttgtccttctacacgactgaagagcaggtgtataat
cacttcagtccttgtggacacatccgcgatatcgtgatgggcctcaacgaggcgacacgc
tgtccatgcgggttctgctttgtcgtgttcgagtcacaggcggccgcggtactggcggtg
cacggactcgacgggtcactgctggacgaccgcgtcgtgtccgtgagctgggatgtgggc
tgcgacgggagtcgccgctggggccgtggcgctcacggcggccaagtggtagacggcgtt
cgccaaaacctcgacgagggccgcggtggcttgggtgccctgcggcgcgacgcgctgggc
gtgcctgcctcgaccgcggaggacgagctggtcgcctacgattgggtagaggctccaccg
aagcgcagaggtgcccacacaaagtag
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integrated database retrieval system
