Leishmania donovani: LDBPK_310170
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Entry
LDBPK_310170 CDS
T02289
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2, putative
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ldo
Leishmania donovani
Pathway
ldo03020
RNA polymerase
ldo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDBPK_310170
09124 Replication and repair
03420 Nucleotide excision repair
LDBPK_310170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldo03021
]
LDBPK_310170
03400 DNA repair and recombination proteins [BR:
ldo03400
]
LDBPK_310170
Enzymes [BR:
ldo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDBPK_310170
Transcription machinery [BR:
ldo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LDBPK_310170
DNA repair and recombination proteins [BR:
ldo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LDBPK_310170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
13385829
NCBI-ProteinID:
XP_003863107
UniProt:
A0A3S7X436
LinkDB
All DBs
Position
31:complement(39588..43133)
Genome browser
AA seq
1181 aa
AA seq
DB search
MAQDELLDLEDPDIVLDDGIDDENPNDDLDSEDIWEVISSFFREKGLVHQQLDSYNDFLM
RIPKMIESMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFAGGPLPPL
FPNECRLRDMTYDAQAQVTLGVELYHPHADTPHDTFLRNVELGRIPIMLKSMRCNLSGKD
EDELPRLNECPHDQGGYFVINGTEKVLIAQERQAANHVYTFSRQKGLLCEVKSIVEGSLN
KPRTLQIIMQYKNKGPGSGFENLMCRVAQMDETIPLFVLFRAMDMVADKEILQTVVPDLK
DTAMLELLRGSMSDASTLQIFTREEALGYIGRRLGKQDAMANLQREAESLLMRDLLPHMG
TDPSANRTKCLYMGYMVHKLLLVALGRHEETDRDFLGHKRIDVAGTLLTVQLQTFLAQVR
KEMIKTLQDHAANPRGVFSFGRVIHSKLITDGLRRCLATGNFGDLKTGNIKTGVAQTLNR
LTYSSSLSNLRRIQNPIAASSKATRPRNLHCTQWGYICPVETPEGGSIGLLKNVALMCLM
SRGTDHAEVVQAVQARIDGFRTIGLEDTADVRVARVFVNGTMIGVDRNPERLLHDLRTRR
RNGELSNEVSIVRDIRDREIRVFSDAGRCLRPLFVAENCHLKLRKSGMRNLLVSEKAGGK
KSISWNTALKKGYVELIDCEEEDSLLIAMTPNEVEKNYYYSHCEMDPSMILGICASIIPY
PNHNQSPRNTYQSAMGKQAMGIYASNFNMRMDTTAHVLFYPQKPLVRTKAMTYMHSNDLP
AGHNAVVAISCYSGYNQEDSIIMSRSAVERGFFRSAFWRSFKAKEERQKRDALETFENPD
RELCRVKRADYSKLDTDGLIKPGMRVLGGDVVVGKTIPLPEADLEKLTTGNTKITKRDAS
ITSRTTEKGVVDKVMLTMNNNDRFTKVKIRTIKIPNIGDKFCSRHGQKGTNGIQFRQEDM
PFNRDGIVPDLIINPHAIPSRMTVAHLIETLAGKVACYKGGEVYATPFCSVVVDDFGKAL
HALRSQRYGNECLYNGHTGLPLDHLIFFGPTFYQRLKHLSGDKIHARPRGPLQPLVRQPT
EGRAHEGGLRFGEMERDCMLSYGASQWLRERLFRVSDYYTVHVCNMCGTICVADTKLNRY
QCKGCENDTRISQVLMPYACKLLFQELMSMTILPRLGTGPL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggatgagctgctggatctggaagaccctgacatagtcctcgatgacggcatc
gacgacgagaaccccaacgatgacctcgacagcgaggacatttgggaggtcatctcatcc
ttcttccgggagaagggtctggtgcaccagcagctcgactcgtataacgacttcctcatg
cgcatccccaagatgattgagagcatggcggtcatcccgcgccaagacgaccagtacgac
ccgggtgttacaatggaggagcagcgcgaccagccccggctggtgttgcaggacgtggtg
atcggcaacccatcgcaccagacgcactcgtacttcgccggtggcccgctcccaccgctc
ttcccgaacgagtgccgtctgcgcgacatgacgtacgacgcacaggcgcaggtgacgctc
ggagtagagttgtaccacccccacgcggacacgccgcacgacaccttcctgcgcaacgtc
gagctgggacgcattcccatcatgctcaagtctatgcgctgcaatctcagtggcaaggat
gaggatgagctgccgcggctaaacgagtgcccgcatgaccagggcgggtacttcgtgatc
aacggtaccgagaaggtgctcattgcgcaggagcggcaggccgccaaccacgtctacacg
ttttcccggcagaaggggctgttgtgcgaggtgaagtcgatcgtggagggctcgctcaac
aagccacgcacgctgcagatcatcatgcagtacaagaacaaaggtccgggcagcggcttc
gagaacttgatgtgccgcgttgcgcagatggacgaaacaattccgctctttgtgctgttc
cgggcgatggacatggtggcagacaaggagattctgcagacggtcgtgccggatctcaag
gacacggcgatgctggagctgctgcgtggctccatgagcgacgcaagcacgttgcagatc
ttcacccgcgaggaggcccttggctacattggacgccgtctcggcaagcaagacgccatg
gcaaacctgcaacgggaggcggagagcctgctcatgcgggacttactgccgcacatgggc
acggacccgtccgccaaccgcacgaagtgcctgtacatgggctacatggtgcacaagctg
ctgctcgtcgccctcggccggcacgaggagacggaccgcgactttctcgggcacaagcgc
atcgacgtggcaggcacgctgctgacggtgcagctgcagaccttccttgcgcaggtgcga
aaggagatgatcaagacgctgcaggaccacgccgccaacccgcgcggcgtcttcagcttc
ggtcgcgtcattcacagcaagcttatcacggacggtctgcgccgctgcctcgccaccggc
aacttcggcgacctcaagacaggcaacatcaagaccggcgtggcgcagacactgaaccgc
ctcacctactcgtcctcccttagcaatctgcgccgcatccagaaccccattgccgcctcc
agcaaggcgacgcggccgcgcaacttgcactgcacgcagtgggggtacatctgccccgtg
gagacgccggagggtggctcgatcgggctgctcaagaatgtggcgctgatgtgtctcatg
tcccgcggcacggaccacgccgaggtggtgcaggccgtgcaggcacgcatcgatggcttc
cgcacgatcggtctcgaggacacggctgacgtgcgcgtggcacgcgtgtttgtgaacggg
acgatgattggcgtcgaccgcaacccggagcggctgctgcacgaccttcgcacgcggcgc
cgcaacggcgagctcagcaacgaggtgagcatcgtgcgcgatatccgcgatcgcgaaatt
cgcgtcttctcggacgctggccgctgcctgcgccctctcttcgttgccgaaaactgccat
ctgaagctccgcaagtccggcatgcgcaacctgcttgtctccgagaaggccggcgggaag
aagtcgatctcgtggaacaccgcgctgaagaagggctacgtcgagctcatcgactgcgag
gaggaggactcactactgatcgccatgacgccgaacgaggtggagaagaactactactac
tcccactgcgagatggacccgtcgatgattctcggcatttgcgcctccattatcccgtac
cccaaccacaaccagtccccgcgcaacacctaccagtccgccatgggtaagcaggccatg
ggcatctacgcttcgaacttcaacatgcgcatggacaccaccgcccatgtcctcttctac
ccacaaaaaccgctggtgcgcaccaaagccatgacgtacatgcacagcaacgatctgccc
gccggccacaacgcggtggtggccatctcgtgctacagtggctacaaccaagaggactcc
atcatcatgagccgctctgccgtggagcgcggcttcttccgcagcgccttctggcgctcc
ttcaaggcgaaggaggagcggcagaagcgcgacgcgctcgagacatttgagaaccctgac
cgcgagctgtgccgcgtgaagcgcgccgactattcgaagctggacacggacggcctcatc
aagcccggtatgcgggtcctcggtggcgacgtggttgtgggcaagacgatccctctccct
gaggcggacctcgagaagctcacgaccggcaacaccaagatcacgaagcgtgacgcgagc
atcacctctcgcacgacggagaagggtgttgtggacaaggtgatgctgaccatgaacaac
aatgaccgcttcacgaaggtcaagattcgcaccatcaagatcccgaacatcggcgacaag
ttctgcagccgccatggacaaaaaggcaccaacggcatccagtttcgccaggaggacatg
cccttcaaccgcgacggcatcgtgccggacctcatcatcaacccccacgccattccctcc
cgcatgacggtggcccacctgatcgaaacgctcgccggcaaggtggcgtgctacaagggc
ggcgaggtgtacgcaacgccgttctgctccgtcgtcgtggacgactttggcaaggcgttg
catgcccttcggtcgcagcggtatggcaacgagtgcctctacaatgggcacaccggtctg
ccgctggaccatctgatcttctttggccccaccttctaccagcgcctgaagcacttatcc
ggtgacaagatccacgcacgcccacgcgggccgctgcagccgctggtccgccagccaacc
gagggtcgcgcgcacgagggtggactgcggtttggcgagatggagcgtgattgcatgctg
tcctacggcgcctcgcagtggctgcgggagcgccttttccgtgtcagcgactactacacg
gtgcacgtgtgcaacatgtgcggcaccatatgcgtggccgacacaaaactgaaccgctac
caatgcaagggctgcgaaaacgacacgcgcatctcccaggtactcatgccgtacgcctgc
aagctcctcttccaggagctcatgtccatgacgatcctgccgcgcctcggtaccggtcct
ctgtaa
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