Leishmania donovani: LDBPK_310220
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Entry
LDBPK_310220 CDS
T02289
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ldo
Leishmania donovani
Pathway
ldo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LDBPK_310220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_310220
Enzymes [BR:
ldo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
LDBPK_310220
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LDBPK_310220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
Motif
Other DBs
NCBI-GeneID:
13385834
NCBI-ProteinID:
XP_003863112
UniProt:
E9BME4
LinkDB
All DBs
Position
31:complement(54497..56062)
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AA seq
521 aa
AA seq
DB search
MVALEREYVLGSFCELRIITSLSSTQLSKVTLRKPVEDDDTSTAARAEVFGTELIPGVPV
HLPPGRSLSIFTSTGCTLSLVAPPTVLQRCYATSLGATWVRSLLDFHSHLERARVEARGR
DDVGPRVLFVSDRHHCGASTYVRWLSNFAVRLGYHPLLLDGVLDTPAFAFPGSIALFHAQ
HCMDIEEEMNLTPALYAQVGQSRVANPRLYQHWVQQLLPNGMEKMARSERCRVGGLFFDF
GVVEPHAVEQAEAAAAAVPSVDPTASASPAPAALGSGKTQTNPLDTLLDTIVAADIDHVC
VVGSSWLRWKLVQRAWERFGGEGSMGIVQAMLDPRWNVPPEVDCGGGQHFKVFLLDSVEL
VNSVPVPLLNRQRWLQYFFGTPTSPVKPTLITLEASQVRVATVGAAAIAAMSTLLPMMDS
EDVDRQKADVAAVSFITLQDVALKDRIVAISTATEYERSPDGELHRLPFSVFERRIRHGT
VLGFALVESVTPERLTLLVSGCPLDKELGLCFLLTEEVLKS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtagccttggagcgggagtacgttctcggctccttctgcgagctgcgcatcatcacc
tcgctctcctccacacagctttccaaggtgaccctgcgaaagccggtggaagacgacgac
acgtcaaccgcggcgcgggcagaggtatttgggacagagctgatcccgggagtgccagtg
cacctgccgcccggtcgctcccttagcatcttcacctccaccggctgcaccctgtcactg
gtggcaccgccgacggtgctgcagcgctgctatgcgacgtcgctcggggcgacctgggtg
cgctcgttgctggattttcactcccacctggagcgagcacgagtggaggcccgcggccgc
gacgacgtcggacctcgcgtgctcttcgtgagcgaccgccaccactgcggggcgagcacc
tatgttcgctggctgagcaactttgccgtgcgcctcggctaccaccccctgctgctcgat
ggggtgctggacacccctgccttcgcgttcccaggcagtatagcgcttttccacgcccag
cactgcatggacatcgaggaggagatgaatctgacgccggcgctgtatgcccaagtcggc
cagtcgcgtgtggccaacccacgactctaccagcactgggtgcagcagcttctgccgaac
ggcatggagaagatggcgcgcagtgagcgctgccgcgtgggcggactgttctttgacttt
ggcgtggtggagccgcacgcggtggagcaggcggaagcggcggcggcggcggtgccgagc
gtcgacccaaccgcctctgcttcgcctgcacctgccgccctgggaagcggtaagacgcag
acgaacccactcgacacactcctggacaccattgtggcagccgacatcgatcacgtttgc
gtcgtcggtagctcatggctgcggtggaagctggtgcagcgtgcatgggagcgctttggt
ggtgaagggtcgatgggcattgtgcaggcgatgcttgatccgcgctggaacgtgccgccc
gaggtggactgcggaggtgggcagcacttcaaggtctttcttttagactccgtggagctg
gtaaactcggtgccggtgccgctattgaatcgccagcggtggctgcagtacttcttcggc
accccgacatcgccagtgaagccgaccctcatcaccctcgaggcctcgcaggtgcgcgtc
gcaaccgtcggtgcggcagcgatcgccgccatgtcgacactgctgccgatgatggacagc
gaggacgtggaccggcagaaggcggatgtggcggccgtgtcgttcattaccctgcaggac
gtcgccctgaaggaccgaatcgtcgcaatcagcacagccactgagtacgaacgcagccct
gacggggagcttcaccgactccctttcagtgtgttcgagcgcagaatccggcatggtact
gtgcttgggtttgcgctggtggaatctgtgacaccggagcggctcacgctgcttgtgagt
ggctgcccgctcgacaaggagcttggcctttgctttcttctcacggaggaggtgctgaag
agctga
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integrated database retrieval system
