Leishmania donovani: LDBPK_320410
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Entry
LDBPK_320410 CDS
T02289
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_320410
03041 Spliceosome [BR:
ldo03041
]
LDBPK_320410
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_320410
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_320410
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
LDBPK_320410
mRNA cycle factors
Common to processing body (P body) and stress granule
LDBPK_320410
Spliceosome [BR:
ldo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LDBPK_320410
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
LDBPK_320410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
AAA_22
GRIM-19
Utp25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
13390272
NCBI-ProteinID:
XP_003863460
UniProt:
A0A3Q8IF94
LinkDB
All DBs
Position
32:complement(153614..155458)
Genome browser
AA seq
614 aa
AA seq
DB search
MYKNQAQPQPQPQPQPQAQPQEPSAVAGAMGGYGSYQQQNRQYGGGNRGFNDAQGTYGGG
FNRNGGGGGFRGGFGGFGGGARGPPREFVGNNHYHREEKSEEEIFKEHTPGINFDQYEAI
KVSITPNDVEPAESFATMALAPALAENVNRCRYQKPTPVQKYGIPCVLNGSDLMACAQTG
SGKTAAYLIPAINFMLVNNLNRAKPTNSQSAPSALVLSPTRELSIQIYEEGRKFTYRTGI
RCVVVYGGADPRHQIHELTRGCGLLVATPGRLSDMFTRGYTRYSDVRFLVLDEADRMLDM
GFEPQIRAIVQGPDSDMPPPGERQTLLYSATFPKEIQQMAREFLYHHHFLQVGRVGSTTE
NITQDVRWVEDMDKRGCLLEVLKEHQGERVLVFVEKKRDADYLERYLRQSRIPCSSIHGD
RVQREREEALDIFKSGVCRVLVATDVASRGLDIPNVAVVVQYDLPSNIDDYVHRIGRTGR
AGKRGTAISFFNDKNRNIVDDLIPLLRETNQTVLPEVQALAKKPNVQNQPRGRGRGGFRS
GGFGGGFGGGYGGGYGGRGGYRGGGGFGGGYGGGYGGGYGGNNGGYRPRGGYGGGGYGGG
YGGDRNMRSDVFGQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaatcaggcgcaacctcagccgcagccgcagccgcagccacaggcgcagcca
caggaaccctctgctgtcgctggtgcaatgggcggctacggcagctatcagcagcagaac
cgccagtacggcggcggcaaccgtggcttcaacgatgctcaaggcacctacggaggcggc
ttcaatcgcaacggcggcggtggcggcttccgcggcggctttgggggcttcggcggtggc
gcgcgaggcccgccgcgcgagttcgtcggcaacaatcactatcaccgcgaagagaagtcc
gaggaggagatcttcaaggagcacactccgggtatcaacttcgaccagtacgaggcgatt
aaggtgtccatcactccaaatgacgtggagccggcggagtcctttgccacgatggcgctc
gccccggcactggcggagaacgtgaaccgctgtcgctaccagaagccaacgccggtgcag
aagtacggcatcccgtgcgtgctgaacggcagcgatctgatggcatgtgcccagactggc
tccggtaagactgctgcttacctcatcccggccatcaacttcatgctggtcaacaacctc
aaccgcgccaagcccacgaacagccagtccgccccgtccgcgctggtgctgtcaccgacg
cgcgagctgtccattcagatttacgaggagggccgcaagttcacgtaccgcaccggtatt
cgctgcgttgtcgtgtacggcggggcggacccgcgccaccagatccacgagctgacccgc
ggatgtggtttgctggtggcgacgccgggtcgtctgtctgacatgttcacccgcggctac
acccgctactcggacgtccgcttcctcgtactcgatgaggctgaccgcatgctcgatatg
ggctttgagccgcagattcgcgcgatcgtccagggcccggacagcgacatgccaccgccg
ggtgagcgccagacgctgctgtactcagccaccttcccgaaggagattcagcagatggcc
cgtgaatttctgtaccaccaccacttcctgcaggtcggccgtgtgggctcgaccaccgag
aacatcacccaggatgtgcgctgggtcgaagacatggacaagcgcggctgcctgctggag
gtgctaaaggagcaccagggcgagcgtgtcctcgtgttcgtggagaagaagcgcgatgct
gactacctggagcgctacctgcgtcagagccgcatcccctgctcctccatccacggcgac
cgcgtgcagcgcgagcgtgaggaggctctcgacatcttcaagagtggtgtgtgccgcgtg
ctggtcgcaaccgacgtcgcctcgcgtggtctggacatccccaacgtcgcggtggtggtc
cagtacgacctgcccagcaacatcgatgactatgtgcaccgcatcggccgtacgggtcgt
gccggcaagcgcggtacggcaatctccttcttcaacgacaagaaccgcaacatcgtcgat
gacctgatcccgcttctgcgcgaaacgaaccaaacggtgctgccagaggtgcaggcactg
gccaagaagcccaacgtgcagaaccagcctcgcggtcgcggccgtggtggcttccgcagt
ggtggcttcggcggcggtttcggtggcggctacggtggtggctacggcggtcgcggcgga
taccgcggtggcggcggctttggtggcggctacggcggcggctacggtggtggctacggc
ggcaacaacggcggctaccgtccccgcggcggctacggcggcggtggctacggcggtggc
tacggcggtgaccgcaacatgcgatctgacgtctttggtcagtag
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