Leishmania donovani: LDBPK_330420
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Entry
LDBPK_330420 CDS
T02289
Name
(RefSeq) DNA mismatch repair protein, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
ldo
Leishmania donovani
Pathway
ldo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LDBPK_330420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldo03400
]
LDBPK_330420
DNA repair and recombination proteins [BR:
ldo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LDBPK_330420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
MutS_II
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
13392263
NCBI-ProteinID:
XP_003863866
UniProt:
E9BPX1
LinkDB
All DBs
Position
33:complement(126874..129693)
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AA seq
939 aa
AA seq
DB search
MTDERDGGVVQAFLALGADSSQCFRMFSRGSNPGCYVLGWWATLVAKEYIKSTAVLKKWS
SGNSSSAMVDVVVVNDALCKEIIRDCLLRRGVSVEYYERETAGGSYVCRQRGSPGNITDF
EASLFEVEEAEIQLLASGSLVFGATQDTGTAIGFAALNNTLRQLTFAEYTDTPQLTSLDA
LVAQTNLKELLLCVMSPAASAGAEATFNDDDRITAVRRICERCGVQLSVRSLREIQQLQK
EEAAAKGLEALAEILRVPEERLSLELCPIARQAVENILGRIDVMDPSNRRAFYLRRTVPS
TYMKLDSAAIEALNLVSKKPEPRGTLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDI
NQRLTMVELFVENPILRDMFTTQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPA
ALQVLGTYTGPQSKLLKDEYIAPMEDINDHMANLKTLIEATVDFSDRNAVRMNAAFDDEL
QALHEQLTSTQRQIDKEYGRVLSKYGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKEL
ITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELI
ATLDVFVAWALVVKDCPRPMVRPAVREAPGTVALVKQEGTSARGADAAPVLSFKRLRHPL
VELRQPGYKANPLHLTTQTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQ
VRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIIDELGRGTSTYDGFGLA
WAIAQDVAVRVRATLLFSTHFHELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGP
CGRSYGLYVASLAHLPESVIACAKVKVAEWETFEKEGASKSSAGAALDEAVVRKVSAYAK
RIRELEQQGPGDDHDAAVQRLKLEIRQDADVRPYLCEVA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagcgcgacggtggtgttgtgcaggcctttctggcccttggcgccgactcc
agccaatgctttcgcatgttttccagaggctccaacccgggatgttacgtgctgggctgg
tgggccaccctcgtcgcgaaagagtacatcaagtccaccgccgtgctgaagaagtggtcg
agcggcaactcgtcctccgccatggtggacgttgttgttgtgaatgacgcactctgcaag
gagatcatccgcgattgcttgctgcgccgtggggtgtcggtggagtactacgagcgagag
acggccggcgggtcgtacgtgtgccgccagcgcggctcgccagggaatatcaccgacttt
gaagcatcgctcttcgaggttgaggaggcggagattcaactgctggcgagcggctccctc
gtgttcggtgcaacgcaggacacggggacagcgattggctttgcggcgctgaataacact
ctgcggcagttgacctttgccgagtacacggacacgccgcagctcaccagcctggacgcg
cttgtcgcgcagacgaacttgaaggagcttttgttgtgcgtgatgtcacccgccgcgtcc
gctggcgccgaagccaccttcaacgacgatgaccgaatcactgcggtgcgccgtatatgt
gagcggtgcggcgttcagctgagcgtgcgctcgctgcgcgagattcagcagctgcagaag
gaggaagccgctgcaaaaggcctcgaggcactggcagagatcctgcgagtgccagaggag
cgtctgtcgctagagctctgcccgattgcgcgacaagccgtggagaacattctcggccgc
attgatgtcatggacccgtcgaatcggcgcgccttctacctgcgccgcaccgttccgtcc
acgtatatgaagctggacagcgcggcgatcgaggcgctgaacctggtgagcaagaagccg
gagccgcgcggcacccttccgacgtctgtgttctcgtggctgaaccgctgtcacactggc
atgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgctgcgccgacgatatc
aaccagcgcctcacaatggtggaactcttcgtggagaaccccattctacgcgacatgttc
acgacccaggtgctgaagcggtgcggcgacatggatcgacttaaccgcaaactgcagcgt
cgcagcctcgccctgaaggacacgcaggcgttcctggaatttgtgaatgtcgtccctgct
gctctacaggttctgggcacctacacaggcccgcagtcgaagctcttgaaagatgagtac
attgccccgatggaggatatcaacgaccatatggcgaacctgaagacgctgatcgaggca
acggtggacttcagtgaccgcaatgcggtccgcatgaacgccgcgttcgacgacgagctt
caggccctgcatgagcagctcacgagcacgcagcggcagatcgacaaggagtacggccgc
gtcctgagcaagtacgggtggaatgagaagcagctcaagcacgagtaccacggtacgtat
ggctacgtctttcgtgtctctcgcaaggaggatcgccagctgcgcagcacaaaggaactt
atcacggtaagcacgtccaaggacggcgtacggtttgtgtcagagaagatggcggccctc
agcgagcagtaccggcgcatcagcgacgactacgagacacggcagatggacctcaagcgc
aagcttgtggacaccatcgcctcctacctgcccgtgctcgacgacgccaaggagctgata
gcgaccctggacgtcttcgtggcctgggctctcgtggtgaaggattgcccgcgccccatg
gtgcggccagctgtacgcgaggcccctggcactgtggcgttggtgaagcaggagggaaca
agcgcacgcggcgcagacgcagcgccggtcctctccttcaagcggctccgtcatcctttg
gtcgagcttcgccagccgggctacaaggccaaccctctccatctcaccacgcaaacaaac
ggactgctcattaccggacccaacatgggcggcaagtccacgtacatgcgcagcgtcggt
gtcgcggtggtgctggcgcaagcgggctgctttgtaccggccgatgcggcggaggttcag
gtgcgcgacgctgtcatgtgccgagtcggcgcgaccgatcacttggcacagggcgtctct
acatttatggtggagatgctcgagtctgcctcgattctcacaggcgcgacgcaggatacc
ctcgccatcatcgacgagctcggccgcggtacgtccacgtacgacggcttcgggttggcg
tgggcgattgcccaggacgtggcggtgcgtgttcgcgcgaccctgttgttctccacacat
tttcacgagctgacgcagctgccgcagcagtgcagcgcgctgcagaacatgcactttggc
gccgaggtcgacgagtcggccggaacgctgcgcttctcctacactctccagccaggcccg
tgcggacgcagttacggcctgtacgtcgcgtcgttggcgcacctgccagagtccgtgatt
gcgtgcgccaaggtgaaagttgcggagtgggagacatttgaaaaagagggcgcctcgaag
agcagtgctggagcggcgctcgacgaggcggtggtgcggaaggtttcggcgtacgccaag
cgcatccgtgagctggaacagcagggaccgggcgacgatcacgacgcggcggtgcagcgg
ctaaagctagagatccggcaggacgcagatgtccgcccgtatctgtgcgaggtggcgtag
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