Leishmania donovani: LDBPK_333360
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Entry
LDBPK_333360 CDS
T02289
Name
(RefSeq) beta prime cop protein, putative
KO
K17302
coatomer subunit beta'
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldo04131
]
LDBPK_333360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ldo04147
]
LDBPK_333360
Membrane trafficking [BR:
ldo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LDBPK_333360
Exosome [BR:
ldo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
LDBPK_333360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR19_1st
TPR_8
Motif
Other DBs
NCBI-GeneID:
13392555
NCBI-ProteinID:
XP_003864159
UniProt:
A0A504X499
LinkDB
All DBs
Position
33:1431337..1433991
Genome browser
AA seq
884 aa
AA seq
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MSAGTAATVEFTASSQRVKMVDMHPKEPIFIAALYSGGINLYNYQTQALVRSFDTGTGLP
VRCVRFIPRLQSFVCGCDDMNLRVFNYNTMERTKIFQAHDDYIRCVAVHEQLPLVLTCAD
DMTIRQWDWSKGWTLQMTYEGHQHFCMAVAFNPKDSSTFASASMDCTIKVWRIHIPTPNY
QLEGHEDGVNCVEFYPRGDKPYLLSGSDDRTVRLWDYQTKACLQVFSFHEDNVASVLFHP
DLPVIYSISESDSIAAFSTETFRLLYSCNHSDMGRGWSLATKRHSNMLIAGFDNGVRAYK
VGADKPVFSMDTNGRVLVATGNEITRMDIKAIGPETPDGEVLNVATKDMGTVEATARSIV
HAGNGQFICVLGDDNYTIISSLSLRPKSYGQCVSFVWGPESGAYAVLEGSTTLKVYKGFK
VRVALSLPEVANKLFGGPLLAVRTSSSVMFYDWGTLALIRQIDETPAALEWNSTGELVAL
VTSSSVFLLKFNGDAVAQYLEQNTTTGDDGLDFSFDLVEELDEKVRDVAWVGDCLVYINQ
VHRLNYYIGGEVNNIAVLNRHQYLLGYLPKENRLFCIDKEKSITSYLLQVNAIEYMAAIV
REDFDAANTLLPTIDVSLRDKLSRFVESRGLLQMALEIAMDDERRFDLAVQLKQLSLAHK
IASAANVASHWKQVGDIALEQGYFEMAIESLEKCNDWSGLLLIYTSLNDMEAISRLGDRC
LQSGQANLAFTCYHLTQRHAECVELLQKTGKTGDAAFYARTYCPSLIEDAVAKWRVSVAS
IPRVSQALASPAAYPNLFPSLRNVDLPPPNGPEVGAPLNAQPAPPGASTSLHGSCTAPTV
ADLFQPAAEAPQQPMHAPPFPDNVGSELTGMQELADEEEAWGED
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggcaccgccgccacggtggaatttaccgcctccagccaacgcgtgaagatg
gtggacatgcaccccaaggagcccatctttattgcagccctgtattccggtggaatcaac
ctgtacaactaccagacgcaggcgctcgtccgctccttcgacacaggcacgggtcttcca
gtgcgctgtgtccgctttatcccgcgcctgcagagctttgtgtgcggctgtgatgacatg
aacctgcgtgtgttcaactacaacacgatggagcggacgaagatattccaagcccacgac
gactacatccgctgcgtcgctgttcacgagcagctgccgctggtgctgacgtgcgcggat
gacatgaccattcggcagtgggactggagcaaggggtggacgctgcagatgacttacgag
gggcaccagcacttctgcatggccgtcgctttcaatcctaaggactcctccacgtttgcc
tccgcctcgatggactgcaccatcaaggtgtggcgcatccacattccgacgccgaattac
caactcgagggccacgaggatggcgtgaactgcgtcgagttctaccctcgcggtgacaag
ccgtacctactgagcggatccgacgacaggacggtgcgtttgtgggactaccaaaccaaa
gcctgcctacaggtcttctcctttcacgaggacaacgtcgcgagtgtgcttttccacccg
gacctcccagtgatctactccatctccgagtcggacagcattgccgccttctccacggag
acgttccgcctgctgtactcgtgcaaccactccgacatggggcgcgggtggtcgctggca
acgaagcgccactcgaacatgctcattgccggctttgacaacggcgtgcgggcctacaag
gtcggcgcggacaagcccgtcttctccatggacaccaacggtcgcgtcttggtcgcgacc
gggaacgagattacgcgcatggacatcaaggccatagggccggagacgcccgacggcgag
gtgctgaacgttgcgacgaaggacatgggcaccgtcgaggcgacggcccgctctatcgtt
cacgccggaaacggccagttcatctgcgttctcggtgacgacaactacaccatcatatcg
tccctctcgctgcgtcccaagtcgtacgggcagtgtgtttcatttgtctggggtcctgag
agcggcgcctacgccgtgctggagggctcgacgacgctgaaggtttacaagggtttcaag
gtgcgcgtcgcactttcgctgccagaggtggccaataagctttttggcgggcctctgcta
gcggtgcgcacgagcagcagcgtcatgttctacgactggggcacgctggcactgatccgg
cagatcgatgagaccccggcagcgctcgagtggaactcgacgggtgagctcgtggcgctc
gtcacgagcagcagtgtcttccttctcaagttcaacggggacgctgtagcgcagtacctc
gagcaaaacaccaccaccggcgatgacggcctcgacttctcgttcgaccttgtggaggag
ctggatgaaaaggtgcgcgacgtggcgtgggtgggggactgccttgtctacatcaatcaa
gtgcatcggctcaactactacattggcggcgaggtaaacaacatcgcggtgctgaaccgt
caccagtacctcctcggctacctgccaaaggaaaaccgtctcttctgcatagacaaggaa
aagagcatcacgagctacctccttcaggtgaatgccatcgagtacatggctgccatcgtg
cgcgaggactttgatgccgccaacacacttctccccaccatcgatgtgagcctgcgtgac
aaactgtcgcggtttgtcgagtcgcgcgggctgctgcagatggcgctggagatcgccatg
gatgacgagcgccgcttcgacctggcggtccagctgaagcaactgtcgttggcgcacaag
atcgccagcgcggcgaacgtcgcgtcgcactggaagcaggtgggtgacattgcactggag
cagggctactttgagatggcaatcgagtcgctggagaagtgcaacgactggagcgggctg
ctgctcatctacacgtccctcaacgacatggaggcgatctcgcgccttggcgaccgctgt
ctgcaaagcggacaggccaacttggccttcacctgctaccacctcacccaacgccatgcc
gagtgtgtggagctgctgcagaagaccggcaaaacaggcgacgccgctttctacgcacgc
acctactgcccgagcctcatcgaggacgccgtggctaagtggagggtgtcggtcgcctcg
atacctcgcgtcagccaagcgctcgccagcccggcagcctacccgaacctgtttccgtca
ctgcgcaatgtggacttgccgcctccaaacggaccggaggttggcgcccctctgaacgca
cagccggcacctcccggtgcatccacgtcgctccacggctcatgcaccgcaccaactgtt
gccgacttgttccagccggcggcagaggcaccccagcagcctatgcacgccccgccgttc
cccgacaatgtgggcagcgagctcaccgggatgcaggagctggcggacgaagaggaagca
tggggagaagattag
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