Leishmania donovani: LDBPK_344140
Help
Entry
LDBPK_344140 CDS
T02289
Name
(RefSeq) coatomer alpha subunit, putative
KO
K05236
coatomer subunit alpha
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldo04131
]
LDBPK_344140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ldo04147
]
LDBPK_344140
Membrane trafficking [BR:
ldo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LDBPK_344140
Exosome [BR:
ldo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LDBPK_344140
Exosomal proteins of bladder cancer cells
LDBPK_344140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
HSDR_N
Motif
Other DBs
NCBI-GeneID:
13387452
NCBI-ProteinID:
XP_003864573
UniProt:
E9BRL2
LinkDB
All DBs
Position
34:1659311..1662901
Genome browser
AA seq
1196 aa
AA seq
DB search
MLTKFEARSSRVKAVALHNSATWVLCGLHNGAVQIWDYRMSTCVDTYTEHVGAVRGADFH
VNQPLFVTGGDDYTVKVWNYKLRRCLFTMMGHMDYVRTTFFHHEQPWIVSCSDDFTIRIW
NWQSRKSIACLPGHNHYVMCAQFHPFSDLVVSGSLDKTIRVWDISALRHRKEEVGITHDL
LGTTDVVVRYELEGHEKGINWVAFHPCGDLLLSAADDRTVRLWTMSGTSCYVSRTFTGHT
SNVCCSVFYRNDYLISCAEDRTIRVVHMSSGVTVQTFRREVERYWIMASDSTRNLIAIGH
DAGLQVFKLTRERPAFAIHNATQLYYTCQNKLHMYNFETEEVASCAVTYQFYPPTALSCC
PTTGGVMLSYVNSGPQVEWIPKPLATRTCNVEATMKGIDGVFFGGHKLAYVDVNGKMCIQ
NVAKASGKPQLTDVSCSRIFPGPVGCVLCQSNDRILLYQVAQHGAVAEATVTGVRYAVWD
KDFSKVALIAKNTVTIMTKRLKIIASVAESSARIKSAAFDETRDVMYFTTSNHLKYCYLR
NGETSTISTLKNVVYLVRAVGDSIYVLTRDGRVLRKELDNVELNFKLKLQQQSYRDLIRI
MQQGKLKGQALVGYLHKHGHSEIALHFVSDSLTRFNLAIECGAMDIAKATAIELNQPAIW
RRLADTATSFGDIQLAQFASAKAGHYYASGLLALLTGNTTSVANLVNTTRDDNFKLHYSM
YMDDAKQRVDILCKVNQLPLAYVTAKSHGLAEMAAQVLQRMEPEVAARVQAQRFHPAPQK
RTVEPATENWPMLQVEESVFARLLKEPGHLDIIAQPELDEDVAAGTGWDDDEDDGTLLGS
AGAGAGDAGALADKDEMGGGWDDDLDIDVSTALPDAGGATSASSGYVVPREHPPIMQAWA
DAYTLPAFHVAAGSFASALRLLQRQIGLADPTPLKPYMLQLWAAVNVCRPAPNGLCVVFA
MPTPPPDSETEARHAPALPDFMPALAEKLRFGYQLFVEGKFSEALDVFRSILHLSVVTVV
KDDQQKATLREIMAIAPEYTRALALQLQLRTLNASSVESLQLALYFTHFRLHRAHLTLAL
SQAMSKAYKQKNIKTAAEVARRLLEQDPPKNKAQQAAAIIAEADRNPTNAVEIDYDERNP
FTICSATYKPMYKGVVSPMRCSYCLSPAHPSYKGTLCPVCKLAKIGVDSAGLVNRI
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgaggcccgctcgtcccgcgtgaaagcggtggcgctgcacaacagc
gccacgtgggttctgtgcggattgcacaacggtgctgtgcagatttgggactatcgtatg
agcacttgtgtcgacacgtacacagagcatgtgggcgcagtgcgcggcgcggacttccac
gtgaatcagcccctcttcgtcactggcggcgatgactacacagtgaaggtgtggaactac
aagctgcggcgctgcctctttacgatgatggggcatatggactatgttcgcaccaccttc
ttccaccacgagcagccgtggattgtgtcttgctcagacgacttcaccatccgtatctgg
aattggcagagtcgaaagagcatcgcgtgcttgccgggccacaaccactacgttatgtgc
gcgcagtttcacccgttcagcgaccttgttgtgtcgggcagcctggacaagacaatcaga
gtgtgggacatctcggcgctgcggcaccggaaggaggaggtgggcatcacgcacgatctc
ctaggtacgacggatgtggtggtgcggtacgagctggaggggcacgagaagggtatcaac
tgggttgcctttcacccgtgcggcgacctgctgctctctgccgccgatgaccgcacagtg
cgcctgtggacgatgtcggggacatcgtgctacgtctctcgcacgttcaccgggcacacc
agcaacgtctgctgctccgtcttttacaggaacgactatctcatctcctgtgcagaggac
cgcacaattcgcgtggtgcacatgtcctccggcgtgacggtgcagacgttccgtcgcgag
gtcgagcgctactggatcatggcaagcgactcgacgcgcaacctgatcgccattggtcac
gacgcgggtctgcaggtcttcaagctcactcgggagcggcccgccttcgcgatccacaac
gccacgcagctctactacacatgccagaacaaactccacatgtacaacttcgagaccgag
gaagtcgcttcctgtgctgtcacctaccagttttacccgccaacggcgctctcgtgctgc
ccgacgaccggaggcgtgatgctctcctacgttaacagtggcccgcaagtagagtggatt
ccgaagccactggcgacaaggacatgcaacgtggaagctaccatgaaaggcatcgacggc
gttttctttggtgggcacaagctcgcctacgtggacgtcaacggaaagatgtgcatccaa
aacgtggccaaggccagtggaaagccgcagctgaccgacgtgtcgtgcagtcgcattttt
cctggccctgtcggctgcgtcctttgccagagcaacgacaggatcctcctgtaccaggtg
gcacagcacggcgcggtggcggaagcgacggtgacaggggtgcggtacgctgtgtgggac
aaggatttctccaaggtggcgctcatcgccaagaacacggtgaccattatgacgaagcgc
ctcaagatcatcgcgtcggtcgccgagtcgtcggcccgcatcaaatccgccgcctttgac
gagacgcgggacgttatgtacttcaccacatccaaccacctcaagtactgctacctgcgc
aacggcgagacgagcactatcagcacgctcaagaacgtcgtctatctggtgcgcgccgtg
ggcgactctatctacgtcttgacgcgcgacggtcgcgttctgcgcaaggagctggacaac
gtggaactgaacttcaagctgaaactgcagcagcagtcgtaccgcgacctcatccgcatt
atgcagcaaggcaagctcaaaggtcaggccttggtcgggtacctgcacaagcacggacac
tccgagatcgccttgcacttcgtcagcgactcgctcacgcgcttcaatcttgccatcgag
tgtggcgccatggacattgccaaggcgaccgcgattgagctcaaccagccagccatctgg
cgtcgcctcgccgacaccgccacaagctttggtgacatccagctggcccagtttgcgagt
gccaaggctggccactactacgcctctggcctgcttgcccttctcacgggaaacaccacc
tcggtggccaaccttgtcaacaccacccgcgacgacaacttcaagctgcactatagcatg
tacatggacgacgcgaagcaacgcgtggacatcctctgcaaggttaaccagctgcctctg
gcgtacgtgacggcgaagtcgcacggtctggcagagatggcggcgcaggtgctgcaacgg
atggagccggaggtggcggcgcgcgtgcaggcgcagcgattccatccagcaccgcagaag
cgaacggttgagccagccacggagaactggcctatgctgcaggtggaggagtccgtgttc
gcgcggctgttgaaggaaccgggccatttggacatcatcgcccagccggagctcgacgag
gacgtcgccgccggcactgggtgggacgacgacgaggacgacggcacgttactgggtagc
gcgggtgcaggcgccggcgatgcaggggcgctggccgacaaggatgagatgggtggcggc
tgggacgacgacctcgacattgacgtgtccactgctctcccggatgctggcggcgcgact
tccgctagcagtggctacgtcgtgccgcgcgagcatccgcccattatgcaggcatgggcg
gacgcctacacacttcctgctttccacgtcgctgccgggtcttttgcgagtgcgctgcgc
ctgctgcagcgccagatcggcttggcagacccgacgccgctgaagccttacatgctgcag
ctgtgggcagccgttaacgtgtgcaggcctgcaccgaacggcctgtgtgtcgtgttcgcc
atgcccacgccgccgccggacagcgagacggaggcgcgccacgcccccgcgcttccggac
ttcatgcctgcgctcgccgagaagctgcgcttcggctaccagctgttcgtcgagggcaag
ttttcggaggcgctggatgtcttccgcagcattctgcacctctctgtcgtcaccgttgtc
aaggatgaccagcaaaaggcaacgctgcgcgaaatcatggcaattgccccagagtacacg
cgcgctctcgcgctgcagctgcagctacgcaccctcaacgcctcctctgtggagtcgctg
cagctggccctgtacttcacacatttccgccttcaccgcgcgcaccttacactggctcta
tcgcaggctatgagtaaggcgtacaagcagaagaacatcaagaccgccgctgaagtggcg
cgccgtctgctggagcaggacccacccaaaaacaaggcacagcaggctgctgctattatc
gccgaggcagaccgcaaccccactaacgccgtcgaaatagactacgacgagcgcaacccg
ttcaccatatgctctgccacctacaagcccatgtacaagggtgtcgtgagcccaatgcgg
tgcagctactgcttgtcgccggctcacccatcctacaagggaaccctctgccctgtgtgc
aagttggccaagattggcgtcgacagtgcaggtctggtcaatcgaatttga
DBGET
integrated database retrieval system
