Leishmania donovani: LDBPK_350370
Help
Entry
LDBPK_350370 CDS
T02289
Name
(RefSeq) ATP-dependent DEAD-box RNA helicase, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_350370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_350370
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_350370
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_350370
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
LDBPK_350370
mRNA degradation factors
5'-3' decay
Decapping complex
LDBPK_350370
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
LDBPK_350370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
13387508
NCBI-ProteinID:
XP_003864630
UniProt:
A0A3Q8IEU7
LinkDB
All DBs
Position
35:93344..94561
Genome browser
AA seq
405 aa
AA seq
DB search
MSDSNWKAQLNAPQKSTRKKTEDVESRRNVNFEEYALRRELQMGIFEKGFEKPSPVQEEA
IPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRESYVQALLMVPTRELALQTAQVTKE
LGKHIPGLEVMVTTGGTTLRDDILRLTSKVHILVATPGRVLDLASKKAVDLSHCHILVLD
EADKLLSQEFMEIIDDLYTYLPSQLQSMLFSATFPVTVKTFAERHLHNPYEINLMDELTL
KGVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHA
RMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSG
RFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPIPAEIDPELYAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgaactggaaggctcagctgaacgcgccgcagaagagcacgcggaaaaag
acggaggatgtggagtctcgccgtaacgtcaacttcgaggagtacgccctgcgccgcgag
ctgcagatgggcatcttcgagaagggcttcgagaagccaagccctgtgcaggaggaagcc
attcctgtcgcgcttcagggcaaggacgtgcttgcccgtgccaagaacggtactggcaag
acagcctcattcgtgatcccagtgctcgagaaggtcgacacccgcgagtcgtatgtccag
gctctcctgatggtgcccacccgtgagctggccctgcagacagcgcaggtgacaaaggag
ctgggcaagcacatccccggcctggaggtgatggtgaccaccggtggtacgacgctgcgc
gatgatattcttcgcctgacaagcaaggtgcacattctggtggcgactcccggccgtgtg
cttgacctggcgagcaagaaggcagttgacctttctcactgccacatcctggtgctggac
gaggccgacaagctgctctcccaggaattcatggagatcatcgacgacctgtacacttac
ctcccttctcagctgcagtccatgctcttctctgccacgttcccggtgacggtgaagacg
ttcgcggagcgccacctgcacaacccctacgagatcaacctgatggacgagctgaccttg
aagggtgtaacgcagtactatgctttcgtcgaggagcgccagaagatccactgcctcaac
acgctcttcaacaagctgcaaatcaaccagtctatcatcttctgtaatagcgtcaaccgc
gtggagctactcgcgaagaagattactcagctcggctatagctgctactacatccacgct
cgcatgcagcagcagcaccgtaatcgcgtcttccacgacttccgcgagggccactgccgt
aacctcgtctgctccgatctcatcacccgtggtatcgatattcaggccgtgaacgtcgtc
atcaacttcgacttccccaagtacgccgaaacgtacctgcaccgcatcggccgctccggt
cgcttcggtcatctcggtgtcgccatcaactttgtgacgtacgatgaccgctataatgtc
taccgcatcgagcaggagctggacacagagatcaagccgatcccggctgagatcgacccc
gagttgtacgcagcataa
DBGET
integrated database retrieval system
