Leishmania donovani: LDBPK_351210
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Entry
LDBPK_351210 CDS
T02289
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ldo
Leishmania donovani
Pathway
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_351210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldo03041
]
LDBPK_351210
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_351210
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LDBPK_351210
Spliceosome [BR:
ldo03041
]
Complex A
U2 snRNP components
U2 related factors
LDBPK_351210
Complex B
LDBPK_351210
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
LDBPK_351210
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
90S particles
Helicases
LDBPK_351210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
AAA_7
ResIII
AAA_16
T2SSE
SRP54
ABC_tran
nSTAND3
AAA_30
UvrD-helicase
AAA_29
Motif
Other DBs
NCBI-GeneID:
13387586
NCBI-ProteinID:
XP_003864706
UniProt:
A0A3S7X8Z5
LinkDB
All DBs
Position
35:538757..540871
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AA seq
704 aa
AA seq
DB search
MEAKPSSRNPLTGKEYSSRYFTLLKGRERLPIFAAKSRIQKLVSQYQTLLLVGETGSGKT
TQVPQYILELNPEHGIACTQPRRVAATSVSERVAEEMDVELGEEVGYSIRFDDKSSEKTR
LKYLTDGMLLREAMTDPLLSCYSVIVLDEAHERTVSTDILIGTLKELLPKRPDLRIVVMS
ATLEEKRFQEYFSEAPLVHISGRMYGVEVYNSKAPEANYVEAAIRTATQIHLYEGEGDIL
IFLTGEDEIETTVERLQNGIRMAEHSSANCHHGPIAVLPLYSSLPPSQQRKVFQTVPEGT
RKIVVATNVAETSLTIEGVVFVIDCGFSKQKVFNPKLRVESLLVTPISQASARQRCGRAG
RTRPGKCFRLYTAKSFHSALQPNTYPEILRCNLGSIVLHMKKMGIEDLVNFDFVEPPAPE
TLMRALELLNYLGALDDDGNLTEEGNLMSEFPVDPEMASMLFHSPKFGSSEDIARICAML
SVQNPFITPSNDQRGRAMRCREQFYHPTGDHISYLNIFNVFYEMKNQSSSWCTENYINPR
VMKQAVNIYRQLVGILRRLSLPICSTYTAQQRRVQGDDAPAELEFANEVRRAIVKGYFTK
VALSLPTKHQFMTLKDDVKCLLFPSTYLNRRPKFVVFNELVLTSNTYIRTVTAVSEDWLL
ESSPSYFAQDEFEGITKQVFDEIFRRQGKEKERRSKRARTPSDD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaagcccagcagccgtaatcctttaacgggaaaggaatacagctcccggtac
tttactcttttgaaagggcgcgagcggctccctatttttgcagccaagtcgcgtattcaa
aagctggtgagccagtatcagacgctgcttcttgttggagagacaggcagtggaaagaca
actcaggttcctcaatacattttggagctcaatccggagcacggaattgcctgcacgcag
ccgcggcgtgtcgcggcaacaagcgtgagtgagcgcgtggctgaagagatggatgtggag
ctcggcgaggaggtaggctactctattcgtttcgatgacaagagttccgagaaaacacga
ctgaaatacctgacagatggtatgcttctgcgcgaggcgatgacggatccactgttgagt
tgctacagtgtcattgttctcgatgaagctcacgagcgcactgtatcgacagacattttg
atcggcaccttgaaggagcttcttccaaaaagaccggatcttcgcattgtagtgatgtct
gcaaccctcgaagaaaagcgctttcaggagtatttttcagaggcgccgcttgtccatatt
tccggccgtatgtatggtgttgaggtgtacaactcaaaggcacctgaagctaactatgtg
gaagcggccattcgcacagcaacgcagattcatctctacgaaggcgagggcgacatcctt
atttttttgactggcgaagatgaaatcgaaacgactgtggaacgcctgcaaaacggtatc
aggatggcagagcacagcagcgccaactgccaccacgggcccattgcagtcttgcccttg
tactcctccctacccccgtcgcagcagcgaaaggtgtttcagacagttccggagggaacg
cgcaagatagttgtggcgacaaacgtggccgaaacttcattgacaatcgaaggcgttgtt
tttgtgattgactgcggcttttcgaagcaaaaagttttcaatccgaagcttcgagtggaa
tcgctgcttgtaacgccaatcagccaagcgagtgctcggcagcgctgcggtcgtgctggg
cgtacgaggccaggaaaatgctttcgactctatacggcaaaatcttttcactctgctctg
cagcccaacacgtaccctgaaattcttcgttgcaacctcggcagtattgttttgcatatg
aaaaaaatgggtattgaggatttggtgaacttcgactttgtggagccgccggcgcctgag
acgctgatgcgcgcgttggagttgctcaattacctcggcgcattggatgacgacggcaat
ctgacagaggaggggaatttgatgtcagagtttccggtcgatccggaaatggcatcaatg
ctttttcacagccctaagtttggatcttctgaggatattgcacgaatttgtgctatgctg
tcggtgcaaaatccattcatcactccctcaaatgatcagcgaggccgtgcaatgcggtgc
cgcgaacagttctaccatccaacaggggaccacatttcgtacctgaacatctttaatgtg
ttctacgagatgaagaaccagagctcctcttggtgcacagagaactacatcaatcctcgg
gttatgaagcaggcggtcaacatttaccgccaacttgtcggaatcttgcgacgtctgagt
ttgcctatttgcagcacgtacacagcgcagcagcggcgcgtgcagggtgatgacgctcca
gcggagttggaattcgcaaacgaggtgcgtcgcgccatagtgaaagggtacttcacaaag
gtggcgctctctcttccgacaaagcaccagtttatgacgcttaaagacgatgttaagtgc
cttctttttccatcgacatacctgaaccgccgccccaaatttgtggtatttaacgagcta
gtcctcacgagcaacacgtatattagaacggtaacagctgtctccgaagactggctgctc
gagtcgagcccttcgtacttcgcccaggatgagtttgaaggcattacgaagcaagttttt
gatgagattttccgaaggcaaggcaaggagaaagagcgtcgttcgaaacgagcacggaca
cccagtgatgactag
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