Leishmania donovani: LDBPK_362260
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Entry
LDBPK_362260 CDS
T02289
Name
(RefSeq) DEAD box RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Pathway
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_362260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldo03041
]
LDBPK_362260
03009 Ribosome biogenesis [BR:
ldo03009
]
LDBPK_362260
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_362260
Spliceosome [BR:
ldo03041
]
Complex A
U1 snRNP components
U1 related factors
LDBPK_362260
Complex B
LDBPK_362260
Ribosome biogenesis [BR:
ldo03009
]
Eukaryotic type
Pre-60S particles
Helicases
LDBPK_362260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2239
Cas3-like_C_2
P-loop_SecA
AAA_30
ERCC3_RAD25_C
LysR_substrate
Motif
Other DBs
NCBI-GeneID:
13388227
NCBI-ProteinID:
XP_003865341
UniProt:
A0A3Q8IQY6
LinkDB
All DBs
Position
36:862351..864066
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AA seq
571 aa
AA seq
DB search
MAERNYSPFSGFSTTSRGGGGAHRKGSSEGMGSKLAPVNWSAKSLVPGKWKVVDASAIRK
AASVKDDHSASKVKHLSDVEAEEWRQANSITVSDSDQCPNPITEFDMLTAVPQYLKAKLL
EQGFKAPTPIQAQSWSIVLSGRDLVGVAKTGSGKTLAFIVPALAHIALQEPLKVGDGPMV
IVLAPTRELAQQIEQEAIKVLPQSIRCGCIYGGAPKGPQLGLLRQGVHILVATPGRLIDF
MEIKRVNLLRVTYLVLDEADRMLDMGFEPQVRAICGQIRPDRQTLMFSATWPRDIQNLAA
SFQKNWVRINVGSMELLANKDVTQHFILTSEAAKLDELKRLMERHRNQRVLIFCKTKKTA
DYLEFQLKRNGVDCMAIHGDKEQRQREFILERFRKDPRLCVVATDVAARGLDIKELETVV
NYDFPMQIDDYVHRIGRTGRAGAKGASFTMITKHETQLNASTVFQLVELVERAGQEVPGW
LREWAEQGGGYHIPKRNRNMMGSFGRSGPRMRMPGDSPAAGAGSSGGHFGLTPHAKGSPA
FGMPDSAIQNKKFDYSSDDDDSARPAKRARQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgtaactacagccccttttctgggttttccaccacttcccgcggtggtggt
ggtgcccatcgcaagggcagttcggagggaatgggtagcaaactggcgcctgtgaactgg
tcggccaagagcctcgtcccgggcaagtggaaggttgtcgacgccagcgcgatccgtaag
gctgccagcgtgaaagatgaccacagcgccagcaaggtgaagcacctcagcgatgtcgag
gcggaagagtggcgtcaggccaattccatcacagtttccgactccgaccagtgcccgaac
ccaatcaccgagttcgacatgctcaccgccgtgccgcagtacctgaaggcgaagcttctg
gagcagggtttcaaggcccccactccgattcaggcgcagtcttggtcgatcgttctgtcg
ggacgcgacctcgtcggcgtggccaagaccggctccggcaagaccttggcgttcattgta
ccagccttggctcacatcgcgctgcaggagccgctgaaggtgggggacggcccaatggtc
attgtcctcgcgcctacccgcgaactggcccagcagatcgagcaggaggcgatcaaggtg
ctgccgcaaagcattcggtgcggctgcatttacggcggtgcgccgaagggcccgcagctc
ggcctgcttcgccagggtgtgcacatcctcgtggccaccccaggccgcttgatcgatttc
atggaaatcaagcgtgtgaacttgttgcgtgtaacgtacctggtgctggatgaggcggat
cgcatgctggacatgggctttgagccgcaggtgcgcgccatctgcggtcaaattcgccct
gaccggcaaacgctcatgttttcggctacgtggccgcgcgacatccagaacctcgccgcc
agcttccagaagaactgggtgcgcatcaacgttggcagcatggagctgctcgcaaacaag
gatgtcacgcagcatttcatcttgacctcagaggcagcgaagctcgatgagctgaagcgg
ctgatggagcggcaccgcaatcagcgcgtgctcatcttctgcaagacaaagaagacggct
gactacctcgagtttcagctgaagcgcaacggcgtggattgcatggcgattcacggcgat
aaggagcagcgtcagcgtgagtttatcctggagcgcttccgcaaagacccgcgactgtgt
gtggtggccactgacgtggccgctcgcggtctcgacatcaaggagttggagacggtggtg
aactatgacttccctatgcaaatcgacgactatgttcaccgcatcggccgcacgggccgc
gccggggctaagggtgcgtcctttacgatgatcacgaagcacgagacccagctgaacgcg
tcgacggtgttccagctggtagagctggtagagcgcgcggggcaggaggtgcctgggtgg
ttgcgcgagtgggccgagcagggtggcggctatcacatcccgaagcgcaaccgcaacatg
atgggcagcttcggccgcagcggcccgaggatgcgcatgccgggcgatagcccggctgct
ggagccggtagcagcggcggccactttggcctgacgccacacgctaaaggctcgccggcg
ttcggcatgccggacagcgcaattcagaacaagaagtttgactacagcagcgacgacgac
gactctgctcgaccggccaagcgcgcgcgccaatag
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