Leishmania donovani: LDBPK_363170
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Entry
LDBPK_363170 CDS
T02289
Name
(RefSeq) exosome complex exonuclease rrp41, putative
KO
K11600
exosome complex component RRP41
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_363170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_363170
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LDBPK_363170
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
LDBPK_363170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1623
Motif
Other DBs
NCBI-GeneID:
13388318
NCBI-ProteinID:
XP_003865432
UniProt:
E9BU26
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Position
36:complement(1243188..1243928)
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AA seq
246 aa
AA seq
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MSRQKEYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESL
HKQEAKHDKGLVTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQ
IHIYIEVLQKDGNEKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTNDELRS
QCPVIAAAFTGHDTRNIIWLETASRLPPDSAARLLKCAEEGATKLFETAMRKALEEHAKK
ILTLQS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaaaaggagtacgtcagtccagcgggtcttcgcctggacggccgtcgcccg
ctggaggcacggcgcatggacatcgcattcggcacgctttccgcgtgtgacggcagttgc
gacatcacgcttgggcagtcaaaagtgtgcgcatgcgtctttgggccgcgagagtcgctc
cacaagcaggaggcaaagcacgataaggggctcgtcacgtgcgaagtggcggtcgccgct
tttgctggagaaaaccgtcgcaatccgcagaggcgtagcaagctctcggaggacatcggc
gccgctgtggtgcaagtggcccgctccgtcattctcctctcccagtatccaaactcgcag
attcacatttacatcgaggtccttcagaaggacgggaacgagaaaatcgcgtgcgtcaac
gcggcgtgcctcgccctgatcgatgcaaacgttgccatgcgggacgcggtgtgctgcatc
gatgcaggcattctggatgagcacatgctgatagatttgacaaacgacgagttgcgctct
cagtgtccagtgattgcggcggcattcacgggacacgacacgcggaacatcatttggctg
gagacggcgtcgcggctacctccagactcggcggcgcggctgctcaagtgcgcggaggag
ggtgccacgaagctctttgagacagcaatgcgaaaggcgctggaggaacatgcaaagaag
atcttgacgctacaaagctag
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