Leishmania donovani: LDBPK_365120
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Entry
LDBPK_365120 CDS
T02289
Name
(RefSeq) exosome-associated protein 4, putative
KO
K12587
exosome complex component MTR3
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_365120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_365120
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LDBPK_365120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
NRG4_TM
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
13388512
NCBI-ProteinID:
XP_003865626
UniProt:
A0A3S7XBS2
LinkDB
All DBs
Position
36:complement(1912585..1913250)
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AA seq
221 aa
AA seq
DB search
MKRADGRESPRAVRAIHVATNVLANCHSSACVEIGKTRVLCGVRPPQHLVQEYRGTRGRV
SCQVHRSLASSSNLDNSGDRDMALALEGVAEQAVVLERIPQLLVGALIEVVHDDGAVWDA
ATTALCVALTAGGVEVYDTFSACSAALRRDGAIIVDLTREEAATAMASVVVCSGLSLGGV
YYCCHKGACEATTMSQLVQAATKGLQVRKVPLLEQIRNQLV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagctgacggtcgcgagtctcctcgggcggtgcgcgccattcacgtcgccacc
aacgtgctggccaactgccacagcagtgcctgtgtcgagattggcaagacgcgcgtcctg
tgcggtgttcgcccgccgcagcatctggttcaggaataccgcggcacgcgcggacgtgtc
agttgccaagtccaccgcagcttggcctcctcgtcgaaccttgacaactctggtgaccgc
gacatggcccttgcgctggagggagtcgcagagcaagccgtggtgctggagcgcattcca
caactgctggtgggggccctaattgaagtggtgcacgacgacggggctgtatgggatgcc
gcaacgacggccttgtgcgtcgctctcacggcaggtggcgtggaggtctacgacaccttt
tcggcgtgcagcgccgcattgcggcgcgatggtgccataattgtcgacctcacgcgagaa
gaggcggcgacggcgatggcgagcgtggtagtgtgcagcggcctctccctcggcggcgtg
tactactgctgccacaaaggcgcgtgtgaggcaacaacgatgagccagctggtgcaggcg
gcgacgaaggggctgcaggtgcgcaaggtcccgctcttagagcaaatccggaaccaacta
gtctag
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