Lapidilactobacillus dextrinicus: LH506_00660
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Entry
LH506_00660 CDS
T06302
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH506_00660 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ldx02000
]
LH506_00660 (abc-f)
01504 Antimicrobial resistance genes [BR:
ldx01504
]
LH506_00660 (abc-f)
Transporters [BR:
ldx02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LH506_00660 (abc-f)
Antimicrobial resistance genes [BR:
ldx01504
]
Gene variants
Macrolide resistance genes
Transporters
LH506_00660 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
AAA_22
AAA_16
AAA_15
nSTAND3
NACHT
AAA
RNA_helicase
AAA_28
MMR_HSR1
TsaE
NPHP3_N
DUF5615
AAA_7
RsgA_GTPase
NTPase_1
ABC_tran_Xtn
nSTAND1
AAA_14
DUF463
PduV-EutP
VapE-like_dom
AAA_27
cobW
Dynamin_N
FtsK_SpoIIIE
ATPase_2
DUF445
Motif
Other DBs
NCBI-ProteinID:
QFG46069
LinkDB
All DBs
Position
152457..153965
Genome browser
AA seq
502 aa
AA seq
DB search
MSNIEIKNLTFGYDSQGTLLFDQANLNIDSSWKLGLIGRNGRGKTTLMRLLQEQLPYQGQ
ITKQLDFTYFPQTIANPDQLMFYAIQEISDAEQWEIERELNLLGVDPDILWRQFASLSGG
EQTKVLLALLFINETDFPLIDEPTNHLDMTGRQQVADYLNKKQQGFIVVSHDRHFVDSVT
DHIMSIEKSQILLYQGNFATYEVQKKLNDDFEQQQNAKLKKNISRLQQSAAKKASWSNSR
EADKHHQRTAHVGNEQRSVDKGFIGSRAAKMMKRSKNIAQRMNNEIADQEKLLKDIEYID
PLTMAFQPVHYQNPLIIKEVQLGYDEQWLFKPLSFDLKVHQRLAITGPNGAGKSSLIQAI
LQQFTGNQRGSITYPKQLPISYVRQNYENNRGSLAEFAEKNQLNMQDFLNNLHKLGMERR
VFNNKIENMSMGQRKKVELAKSLSQPAALYIWDEPLNYLDVFNQEQLENLIQEVQPTMLI
IEHDCDFIDKVATNQLKLETVD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacattgaaattaaaaatttaacatttggctatgatagccaggggacattacta
tttgatcaagctaatctaaatattgattcgtcttggaaattagggttaatcggtcgtaat
ggtcgcggcaaaacgacgttaatgcgcctgttacaagaacaattaccatatcaaggacaa
attactaagcaacttgactttacttattttccgcaaaccattgctaatcctgatcaattg
atgttttatgccatccaagaaatttctgatgcagagcaatgggaaattgaacgtgaatta
aatcttctcggtgttgatcctgatattttatggcgtcagtttgctagcctttctggtggc
gagcaaactaaagttttgttggcacttttatttattaatgaaactgattttccattgatt
gatgagccaactaatcatttggatatgactgggcgccaacaagttgccgattacttaaac
aagaaacagcaaggttttattgtagttagtcatgatcgtcattttgtcgatagtgtgacc
gatcatattatgtcgattgaaaagagccagattctgttgtaccaaggaaattttgcaact
tatgaagtacagaaaaaattaaatgacgattttgaacaacaacagaatgctaaattaaaa
aagaatatttcgcgtctacaacaatcagcagctaagaaagcaagttggtctaattctcgg
gaagccgataaacatcatcaacgaacagcacatgtgggtaatgaacagcgctcagttgac
aaagggtttatcggttcgcgggctgccaaaatgatgaaacgttctaaaaatattgcccag
cgaatgaataacgaaattgctgatcaagagaagttgttaaaggatattgaatacattgat
ccgttaaccatggcatttcaaccagtacattatcaaaatcccttaataattaaagaggta
cagttaggttatgatgaacagtggttatttaagccattatcctttgatctcaaagttcat
caacgcttagcaattactggccctaatggagctggtaaatcatcactgattcaagcaatt
ttgcagcaatttactggcaatcaacgcggaagtatcacgtatcctaagcaattaccaatt
agttatgtacgtcaaaattatgaaaataatcgtggctcgttagcagaatttgccgagaaa
aatcagttgaacatgcaagattttctaaataatttgcacaaattagggatggaacgacgt
gtttttaataataaaattgaaaatatgagtatgggtcaacgtaaaaaagttgaattggcc
aagtcattgtcgcaaccagctgctttgtatatctgggatgaaccgttaaattatttagat
gtttttaaccaggaacaattagaaaatttaattcaagaagtgcagccaacgatgctgatt
attgaacatgattgcgattttattgataaagtagctactaatcagttaaaattagagacg
gttgattag
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