Lapidilactobacillus dextrinicus: LH506_01085
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Entry
LH506_01085 CDS
T06302
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LH506_01085 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_01085 (uvrA)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH506_01085 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LH506_01085 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_21
AAA_33
nSTAND1
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
AAA_23
NACHT
cobW
BCA_ABC_TP_C
Septin
DUF1924
Aq_aa27
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QFG46135
LinkDB
All DBs
Position
243845..246733
Genome browser
AA seq
962 aa
AA seq
DB search
MPNDKIVIHGARAHNLKNIDVTIPRDKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTVISSQSVDQMTDKVLSLPERTKIQIFAPIVRAKKGQHKKAFEKIQREGYVRMR
VDGEMHEITDEIELDKNKKHDIDIVIDRLVVKDGIRSRLFDSLEAALRLSDGYANVDVIG
GEMLVFSEHYACPLCGFTVGEMEPRLFSFNAPFGACPDCDGLGVKLEVDLDLVVPDPSLT
LNEGALAPWNPISSQYYPELLAQAAHAFKINMDKPFNKLTERQRNIVLYGNGDKKFHFHY
ENDFGGVRDVDVEFEGVITNVKRRYKETNSDFTRQTMRQYMTELTCETCHGARLNPQALA
VKVSGKNIAEVSDYAVKDALPFFKEVTLSEQNTTIAKPILKEVKDRLSFLMNVGLDYLTL
SRAAATLSGGEAQRIRLATQIGSNLSGVMYILDEPSIGLHQRDNDRLIGSLKKMRDLGNT
LIVVEHDEDTMRAADYLIDIGPGAGENGGHVMAAGTPEEVAANPKSLTGRYLAGKEFIPV
PLKRRKGNGKSIKIVGAAEHNLKDIDVSFPLGKFDVVTGVSGSGKSTLVNTILKRVLAQK
LNHNSEKPGKYQKIVGWQNIDRLIDIDQSPIGRTPRSNPATYTGVFDDVRGLFAQTNEAK
LRGYTKGRFSFNVKGGRCEACKGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYKN
KNISDVLHMTVAEALDFFAAIPKIRRKLQTIVDVGLGYVQLGQPATTLSGGEAQRMKLAS
ELHKQSVGHNLYILDEPTTGLHADDIKRLLQVLNRLVDDGNTVLIIEHNLDVIKTADHLI
DLGPEGGEGGGYIVATGTPEELAEVKESYTGQYLKTILDRDRQRTLAEKEVEMSAATTET
EE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaatgataaaatagtgattcacggtgcgcgagcacacaatttaaagaatattgac
gtgacgattccccgggataaattagtcgtaatgaccggtttatccggttctggaaagagt
tcgttggcttttgatacgttatatgcagaagggcaacgccgttatgtagaaagtttatcg
gcgtatgcacgtcaattcttggggcagatggataaacctgacgttgactcgattgacggt
ttaagcccagccatttcaattgatcaaaaaacaacctcgaaaaatccccgctcgactgtt
ggtacagtcacagaaatcaatgactatttacgtttattgtgggcccgagttggtacgcca
atttgccctaatgatggtacggtcatttcgagtcagtcggtggatcaaatgacggataaa
gttcttagtttaccagaaagaactaaaattcagatttttgcaccaattgtacgtgctaaa
aaaggtcaacataaaaaagcttttgaaaagattcaacgtgaaggctatgtgcggatgcgt
gttgacggcgagatgcacgaaattacggatgagattgagttagataagaacaagaaacat
gatatcgatattgtgattgatcgtttagtcgttaaagacggcattcgttcacgtttgttt
gattcacttgaagcggcgttgcgcttatctgatggttacgctaacgttgatgttattggc
ggcgagatgctggttttctctgaacattacgcttgtccattgtgtggctttactgttggc
gaaatggagccgcgcctattttcatttaacgcgccgtttggtgcctgtccagactgtgat
gggcttggcgttaagctggaagtcgatcttgacttagtcgtgccagatccttcgctaacc
ctaaatgagggtgctttagcgccttggaatcccattagttcgcaatactatccagagtta
ctagcacaagcagctcatgcctttaagatcaatatggacaaacctttcaacaagttaaca
gaacgccaacgcaatattgttttatatgggaatggcgataagaagtttcatttccactat
gaaaatgattttggcggcgttcgcgatgttgatgttgagtttgaaggcgtgattactaat
gttaaacgccgttataaagaaacgaatagtgatttcacacgtcaaacgatgcggcagtat
atgacggaattaacttgcgaaacttgccatggggcacgtttaaatccgcaagctttagcc
gttaaggttagtggcaaaaatattgcggaagtttccgactatgcggttaaggatgcctta
ccgtttttcaaagaagtaacgttatcggaacaaaatacgacgattgccaaaccaatctta
aaagaagtgaaggatcggctatcattcttgatgaatgttggcttggattatctgacgcta
tcacgtgctgctgctactttatccggtggtgaagcacaacgaattcgcttagcaacccaa
atcggttctaatctttctggcgtcatgtatattcttgatgaaccttccattggcttgcat
caacgcgataatgatcgcttaattggatcattgaagaaaatgcgggatcttggtaatact
ttaattgtggtcgaacatgatgaagataccatgcgtgctgctgattatttaatcgatatt
ggcccaggcgctggtgaaaacggagggcatgtcatggccgccggaacacctgaagaagtg
gcggctaatcctaagtcattaactggtcggtatttggctggcaaggaatttattcccgta
ccattaaaacgccgtaaaggtaacggcaagtcgattaaaatcgtcggtgctgccgaacat
aacctgaaagatattgacgtcagttttccactgggtaagtttgatgttgtgaccggtgtt
tctggttcaggtaaatcgaccttggttaacacaattttgaaacgcgtcttggcccagaaa
cttaatcacaattctgaaaagcccggtaagtatcagaaaattgtaggttggcaaaatatt
gatcgcttgattgatattgaccaaagtccaattggccggacaccacgtagtaatccggcg
acttatactggtgtttttgatgatgtgcgtggcctatttgcacaaacgaacgaagctaag
ttacgtggttatactaaaggtcgctttagtttcaacgttaaaggtggtcgttgtgaagct
tgtaaaggcgatggcattattaagattgagatgaacttcctgcctgatgtttatgtacct
tgcgaagtttgtcatggcactcgttataactcagaaactttggaagtaacttataagaat
aagaatatctctgatgttttgcatatgacagttgcagaagctttggacttttttgcggct
attccaaaaattcgtcgtaaactacaaaccattgttgatgttggcttgggctatgttcaa
cttggacagccagctaccacgttatctggtggtgaggctcaacgaatgaagctagcctct
gaactgcataaacaatccgttggtcataatttgtatattttggatgaaccaactaccggg
ttgcatgctgatgatatcaagcgtttattacaagtgttaaatcggttagttgatgatggc
aatactgttttaattattgagcataatttagatgtgattaaaacagctgatcacttaatt
gatcttggtccagaaggcggtgaaggtggcggttatatcgtcgctactggaacacctgaa
gaattagcggaagttaaggaaagttataccggtcaatacttaaaaacaattcttgaccgc
gaccgtcaacgcactttagcagaaaaagaagtggaaatgagcgcagcgacaactgagaca
gaagaataa
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