Lapidilactobacillus dextrinicus: LH506_02095
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Entry
LH506_02095 CDS
T06302
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx03420
Nucleotide excision repair
ldx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LH506_02095
03430 Mismatch repair
LH506_02095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_02095
Enzymes [BR:
ldx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH506_02095
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH506_02095
MMR (mismatch excision repair)
Other MMR factors
LH506_02095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD_C_2
UvrD-helicase
UvrD_C
AAA_19
PhoH
AAA_30
DEAD
SLFN-g3_helicase
NACHT
AAA_16
DUF4951
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFG47575
LinkDB
All DBs
Position
451840..454131
Genome browser
AA seq
763 aa
AA seq
DB search
MRNTQAAEQQYLDDVVQKIGQAQKKAQVSIDQAANDEKSINKHFGEEVKLNFGDYSTNLE
TALSIHQQQQMLAERENSWQQSTRRLNTLNRLIDNPYFARLDFHEHGEPKRETIYIGLSS
FTDKNDKFLIYDWRAPISSIYYDGKLGEVTYQTPDGEQSVNITLKRQFLIKKGQIESMFD
TSETIGDQMLLEVLGEKSSTQMKSIVTTIQKEQNKIIRNTKADLLFVQGAAGSGKTSAIL
QRVAYLLYRYRGNLTSSQVVMFSPNQLFNDYIENVLPELGEQNMVQMTYQQYVGRRLPNL
TIVNPTTHFETPQTETAKKISHLKTELKFFKVLESYSRLLEKGGMYFRDLKFQGKPYLTK
EKIAEIYYSFNENYHLANRVDSTKEKLMHMLNSRITPETKKSWVSKLIEGMDKEQLQTLY
DRPDQEFESSDAEYKFLSRKIVTQALKPVGKGINRMRFFNIQAQYLHFLKQVPNLVKLAD
YGLTLEQWQTGLEEVQANFKNHEINLDDVTPFLFLFDLITGKNGDRSMRFIFIDEIQDYT
PFQLAYLQNRFPKAKFTMLGDLNQAIFTRTESRSLLSQVQKLFDRDKTEVVQLTRSYRST
KPITEFTRAILKNGQKIDTFEREGDLPNVMVKNDELALQEGLLAQLKSNDERKITTAIIC
KTKLESEAVAKYLQLQDYPATLIRSENQRLAAGTLVIPAYLAKGLEFDAVILWDLSAKNY
PDEDDRQLVYTVASRAMHRLTIFAKDQVTPILDAVSKQLYVQE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
attcgtaacacacaggcagcagaacaacagtatttagatgatgttgttcaaaaaattggt
caagcgcaaaagaaagcgcaagtttcaattgatcaggctgcaaatgacgagaagtcaatt
aataagcatttcggtgaagaagtcaaactgaacttcggtgattattccactaatttggaa
accgcgttgtcgattcatcagcagcaacaaatgttggctgaacgtgaaaacagttggcaa
caatcaacccgacgtttaaatacgttgaaccgattaattgataatccttattttgctcga
ttggattttcatgagcatggtgaaccgaaacgagagacgatttatatcgggttaagttct
ttcactgataaaaacgataaattcttaatctatgattggcgtgctccaatttcatctatt
tattacgatggtaaattaggtgaggtgacttatcagacacctgatggtgaacaatcggtt
aacatcactttgaagcgccagttcttaattaaaaaaggtcaaattgaatcaatgtttgat
acttctgagactattggtgatcaaatgttacttgaagtgctaggtgaaaaatctagtacg
caaatgaaatcaattgtgaccacaattcaaaaagaacaaaacaaaattattcgtaatacc
aaagctgatttgttatttgttcaaggtgcggccggttctggtaaaacgtcagcgatttta
caacgcgtggcttatttactttatcgttatcgtggtaatttaacttcaagccaagtggtg
atgttttcaccgaaccaattgtttaatgattatattgaaaatgtcttgcctgagttaggt
gaacaaaacatggtccaaatgacgtatcaacaatatgttggtcgccgtttacctaatttg
acaatcgttaatccaaccacccattttgaaacaccacagacagaaaccgccaagaagatt
tcacatttaaaaacagaattgaagttctttaaggtcctagaaagttatagccgcttacta
gaaaaaggtggcatgtatttccgtgatttgaagttccaaggtaagccttatttaactaag
gaaaagattgctgaaatttattatagttttaacgagaactatcatttagccaatcgagtc
gattcgactaaagaaaaattgatgcatatgttaaatagtcgtatcacgccagaaactaaa
aagtcttgggtttctaagctgatcgagggtatggataaagaacaactacaaacgttgtat
gatcgtcccgaccaagaatttgagtcaagtgatgctgaatataaattcctatcacgtaaa
attgtgacccaggctttgaaaccagttggtaagggtattaatcggatgcgcttctttaat
atccaagcccaatacctgcactttttaaaacaagttcctaacttagtgaagttagcagac
tatggtttaacgctggagcagtggcaaactggtcttgaggaagttcaagctaattttaag
aaccatgagattaatcttgatgacgtgacaccgttcctttttttatttgatttaatcaca
ggtaaaaatggcgatcgttcaatgcgtttcatctttattgacgaaatccaagattatact
ccgttccagttggcttatttacagaatcgtttccctaaagcgaaatttacaatgctgggc
gatttgaatcaagctatctttacacgtaccgaaagccgctcgttgttaagccaggtgcaa
aaactatttgatcgtgataaaacagaagtggtgcaattgacccgttcttatcggtcaacc
aagccaattactgaatttacgcgagcaattttgaaaaacggccagaagattgatactttt
gagcgtgaaggtgatttacctaacgtgatggttaagaacgatgagttggcgttacaagag
ggattacttgcacaactgaagtcaaatgatgaacgtaagattactactgcgattatttgt
aagaccaagttggaaagtgaagctgtggcgaaatatttacaactacaagattatccggcg
accttaattcgttctgaaaaccaacgtttagctgctggtactttagttattcctgcatac
ttagctaagggattggaatttgatgccgttattttgtgggatctttcagcaaagaattat
cctgatgaagatgaccgtcaattggtttatacagttgcttcacgggcgatgcaccgatta
acaatttttgcaaaggatcaagtgaccccaatcttagatgctgtgtctaagcagttatat
gttcaagaataa
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